Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 ACTG1P15-201ENST00000570019 1063 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AC024614.1-201ENST00000577546 307 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AC096708.2-201ENST00000577676 512 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 PRR13P5-201ENST00000596581 442 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 MIR8082-201ENST00000612488 81 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AC026951.2-201ENST00000613847 241 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AP006248.3-201ENST00000623580 594 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AC120057.5-201ENST00000623840 154 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AP003485.1-201ENST00000625093 753 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AC243725.1-201ENST00000637164 436 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AC011471.4-201ENST00000638271 216 ntBASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.46□□□□□ -1.38
AMBRA1Q9C0C7 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 TNPO1P2-201ENST00000426249 2665 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AL139384.2-201ENST00000613809 3590 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 RNA5SP333-201ENST00000363466 118 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 RNA5SP334-201ENST00000364825 118 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 SNORA27.3-201ENST00000364937 134 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 RNA5SP35-201ENST00000391257 129 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC019205.1-201ENST00000421830 730 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 MYO5BP3-201ENST00000431872 1279 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 MTCYBP15-201ENST00000433123 1127 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 LSM3P3-201ENST00000436601 306 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AL161626.1-201ENST00000441480 490 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 RPL21P33-201ENST00000444831 484 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 PABPC1P10-201ENST00000464731 381 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 CHCHD2P7-201ENST00000508008 452 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC026407.1-201ENST00000518369 204 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 OR7E10P-201ENST00000526420 991 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 ATP5J2P4-201ENST00000538774 267 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AL121594.4-201ENST00000556211 1196 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC015911.5-201ENST00000587076 451 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC024451.4-201ENST00000602578 752 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC005479.3-201ENST00000602790 431 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AL357094.1-201ENST00000603845 844 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC027271.1-201ENST00000610270 610 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AL445493.3-201ENST00000619568 477 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 uc_338.37-201ENST00000620113 186 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC127071.2-201ENST00000623293 527 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC091059.2-201ENST00000623355 614 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC097655.1-201ENST00000635075 318 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AL353763.1-201ENST00000624467 1628 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AL359195.2-201ENST00000623657 4412 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 AC013488.1-201ENST00000526618 1838 ntBASIC6.45□□□□□ -1.38
AMBRA1Q9C0C7 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms