Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC8.26□□□□□ -1.09
LIG1P18858 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC8.26□□□□□ -1.09
LIG1P18858 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC8.26□□□□□ -1.09
LIG1P18858 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC8.26□□□□□ -1.09
LIG1P18858 AC090666.1-201ENST00000578241 445 ntBASIC8.26□□□□□ -1.09
LIG1P18858 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC8.26□□□□□ -1.09
LIG1P18858 AC119751.7-201ENST00000600494 245 ntBASIC8.26□□□□□ -1.09
LIG1P18858 AC113368.1-201ENST00000603736 382 ntBASIC8.26□□□□□ -1.09
LIG1P18858 AC023513.1-201ENST00000604396 691 ntBASIC8.26□□□□□ -1.09
LIG1P18858 RPS28P1-201ENST00000604589 187 ntBASIC8.26□□□□□ -1.09
LIG1P18858 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC8.26□□□□□ -1.09
LIG1P18858 AC006335.3-201ENST00000613408 292 ntBASIC8.26□□□□□ -1.09
LIG1P18858 AL137246.2-201ENST00000613439 662 ntBASIC8.26□□□□□ -1.09
LIG1P18858 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC8.26□□□□□ -1.09
LIG1P18858 AC008121.2-201ENST00000614647 523 ntBASIC8.26□□□□□ -1.09
LIG1P18858 AC243830.2-201ENST00000618067 630 ntBASIC8.26□□□□□ -1.09
LIG1P18858 AP000842.4-201ENST00000638781 748 ntBASIC8.26□□□□□ -1.09
LIG1P18858 AL596275.2-203ENST00000641951 371 ntBASIC8.26□□□□□ -1.09
LIG1P18858 AC119674.1-209ENST00000642031 997 ntBASIC8.26□□□□□ -1.09
LIG1P18858 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC8.26□□□□□ -1.09
LIG1P18858 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LIG1P18858 TRIM60P14-201ENST00000513444 1419 ntBASIC8.26□□□□□ -1.09
LIG1P18858 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.26□□□□□ -1.09
LIG1P18858 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
LIG1P18858 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
LIG1P18858 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
LIG1P18858 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
LIG1P18858 OR4G1P-202ENST00000641173 1788 ntBASIC8.25□□□□□ -1.09
LIG1P18858 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
LIG1P18858 AL121949.2-201ENST00000403446 1548 ntBASIC8.25□□□□□ -1.09
LIG1P18858 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.25□□□□□ -1.09
LIG1P18858 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 AP004289.1-201ENST00000436307 2205 ntBASIC8.25□□□□□ -1.09
LIG1P18858 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 MIR199B-201ENST00000384849 110 ntBASIC8.25□□□□□ -1.09
LIG1P18858 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 ATP5F1P2-201ENST00000398143 760 ntBASIC8.25□□□□□ -1.09
LIG1P18858 AC113608.1-201ENST00000398740 305 ntBASIC8.25□□□□□ -1.09
LIG1P18858 AL355862.1-201ENST00000412705 353 ntBASIC8.25□□□□□ -1.09
LIG1P18858 MTATP6P20-201ENST00000414147 562 ntBASIC8.25□□□□□ -1.09
LIG1P18858 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
LIG1P18858 USP9YP21-201ENST00000420603 432 ntBASIC8.25□□□□□ -1.09
LIG1P18858 AL596268.1-201ENST00000427910 1048 ntBASIC8.25□□□□□ -1.09
LIG1P18858 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC8.25□□□□□ -1.09
LIG1P18858 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC8.25□□□□□ -1.09
LIG1P18858 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC8.25□□□□□ -1.09
LIG1P18858 FUNDC2P2-202ENST00000443452 493 ntBASIC8.25□□□□□ -1.09
LIG1P18858 AL353803.3-201ENST00000444641 335 ntBASIC8.25□□□□□ -1.09
LIG1P18858 Z73417.1-201ENST00000447373 778 ntBASIC8.25□□□□□ -1.09
LIG1P18858 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC8.25□□□□□ -1.09
LIG1P18858 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC8.25□□□□□ -1.09
LIG1P18858 AC079944.1-201ENST00000485426 495 ntBASIC8.25□□□□□ -1.09
LIG1P18858 RN7SL516P-201ENST00000496127 297 ntBASIC8.25□□□□□ -1.09
LIG1P18858 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC8.25□□□□□ -1.09
LIG1P18858 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC8.25□□□□□ -1.09
LIG1P18858 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC8.25□□□□□ -1.09
LIG1P18858 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC8.25□□□□□ -1.09
LIG1P18858 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC8.25□□□□□ -1.09
LIG1P18858 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC8.25□□□□□ -1.09
LIG1P18858 AC100854.1-201ENST00000520351 341 ntBASIC8.25□□□□□ -1.09
LIG1P18858 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
LIG1P18858 OSBPL9P3-201ENST00000534523 595 ntBASIC8.25□□□□□ -1.09
LIG1P18858 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC8.25□□□□□ -1.09
LIG1P18858 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC8.25□□□□□ -1.09
LIG1P18858 HNRNPA1P71-201ENST00000559135 950 ntBASIC8.25□□□□□ -1.09
LIG1P18858 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC8.25□□□□□ -1.09
LIG1P18858 ULK4P1-202ENST00000565174 503 ntBASIC8.25□□□□□ -1.09
LIG1P18858 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC8.25□□□□□ -1.09
LIG1P18858 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC8.25□□□□□ -1.09
LIG1P18858 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.25□□□□□ -1.09
LIG1P18858 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
LIG1P18858 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC8.25□□□□□ -1.09
LIG1P18858 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC8.25□□□□□ -1.09
LIG1P18858 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC8.25□□□□□ -1.09
LIG1P18858 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC8.25□□□□□ -1.09
LIG1P18858 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC8.25□□□□□ -1.09
LIG1P18858 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 AL031651.1-201ENST00000615357 1438 ntBASIC8.25□□□□□ -1.09
LIG1P18858 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 RNF19BPY-201ENST00000458209 1550 ntBASIC8.25□□□□□ -1.09
LIG1P18858 LARS-212ENST00000510191 3737 ntTSL 2 BASIC8.25□□□□□ -1.09
LIG1P18858 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
LIG1P18858 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
LIG1P18858 AL606490.2-201ENST00000457562 1330 ntBASIC8.25□□□□□ -1.09
LIG1P18858 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
LIG1P18858 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms