Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 MKI67P1-201ENST00000604297 1460 ntBASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 RN7SKP189-201ENST00000365042 330 ntBASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 MIR187-201ENST00000385062 109 ntBASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 PPIAP23-201ENST00000420099 497 ntBASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 RPL7AP71-201ENST00000451120 739 ntBASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 AC021146.11-201ENST00000503319 491 ntBASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 AC021733.2-201ENST00000518830 497 ntBASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 HMGN2P47-201ENST00000559378 272 ntBASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 RN7SL131P-201ENST00000579043 256 ntBASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 AC011497.2-201ENST00000600255 639 ntBASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 AL590032.1-201ENST00000604920 252 ntBASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 AC009120.7-201ENST00000623452 780 ntBASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RHBDD3Q9Y3P4 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 RNA5SP302-201ENST00000364896 100 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 RNU1-55P-201ENST00000365510 158 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AL161742.1-201ENST00000418154 584 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AC091492.1-201ENST00000419844 272 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AL138479.1-201ENST00000426913 484 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 PUDPP2-201ENST00000431423 643 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AL590128.1-201ENST00000433407 286 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AL592114.2-201ENST00000440142 532 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 RN7SL849P-201ENST00000485236 295 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 RN7SL868P-201ENST00000485915 303 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 MTND6P8-201ENST00000503471 522 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AC017007.1-201ENST00000511960 415 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 CARSP2-201ENST00000520688 277 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AC116158.1-201ENST00000560231 2129 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 NQO1-205ENST00000561500 891 ntTSL 3 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AC018558.5-201ENST00000565840 952 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 MIR378C-201ENST00000578683 81 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 RN7SL426P-201ENST00000579106 295 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 RPS27AP19-201ENST00000597285 458 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AL352984.2-201ENST00000611153 546 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AC012254.5-201ENST00000623573 478 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AC106782.7-201ENST00000624024 418 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 AC133555.5-201ENST00000624430 418 ntBASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RHBDD3Q9Y3P4 ZNF806-201ENST00000438300 1774 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms