Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 AP005639.1-201ENST00000526939 192 ntBASIC5.89□□□□□ -1.47
RFT1Q96AA3 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 AL031777.2-201ENST00000611953 196 ntBASIC5.89□□□□□ -1.47
RFT1Q96AA3 uc_338.33-201ENST00000614988 170 ntBASIC5.89□□□□□ -1.47
RFT1Q96AA3 AL354718.1-201ENST00000619764 589 ntBASIC5.89□□□□□ -1.47
RFT1Q96AA3 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFT1Q96AA3 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 OR5AU1-204ENST00000641822 1197 ntBASIC5.89□□□□□ -1.47
RFT1Q96AA3 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFT1Q96AA3 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.89□□□□□ -1.47
RFT1Q96AA3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFT1Q96AA3 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RFT1Q96AA3 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 AC090774.4-201ENST00000578888 1372 ntBASIC5.89□□□□□ -1.47
RFT1Q96AA3 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC5.89□□□□□ -1.47
RFT1Q96AA3 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFT1Q96AA3 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
RFT1Q96AA3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFT1Q96AA3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFT1Q96AA3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFT1Q96AA3 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFT1Q96AA3 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFT1Q96AA3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFT1Q96AA3 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFT1Q96AA3 RNA5SP427-201ENST00000365323 119 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFT1Q96AA3 GYG1P2-201ENST00000426437 1006 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 AC018804.1-201ENST00000430381 618 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 RPL29P7-201ENST00000440227 457 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFT1Q96AA3 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RFT1Q96AA3 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 NDUFB4P1-201ENST00000462398 381 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 AC083806.1-201ENST00000468934 316 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 RN7SL382P-201ENST00000482631 282 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 ANK3-213ENST00000486349 493 ntTSL 2 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 OR5M6P-201ENST00000530227 937 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 AC004232.1-201ENST00000571388 208 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 CTSLP2-201ENST00000580501 394 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 MIR4420-201ENST00000583944 77 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 MIR3159-201ENST00000584572 74 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 AC107993.1-201ENST00000591343 684 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 AC005070.2-201ENST00000604391 260 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 5S_rRNA.23-201ENST00000612086 102 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 FRG2MP-201ENST00000613317 856 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 FKBP1AP4-201ENST00000631775 336 ntBASIC5.88□□□□□ -1.47
RFT1Q96AA3 HBG1-202ENST00000632727 369 ntTSL 3 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFT1Q96AA3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.88□□□□□ -1.47
RFT1Q96AA3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFT1Q96AA3 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFT1Q96AA3 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RFT1Q96AA3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms