Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 IPPKP1-201ENST00000422501 768 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 VNN3-210ENST00000450865 596 ntTSL 4 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC093719.1-201ENST00000480427 441 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC015801.1-201ENST00000585651 153 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC011933.2-201ENST00000578539 2790 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 SELE-204ENST00000367776 3576 ntTSL 5 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 SELE-205ENST00000367777 3576 ntTSL 5 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 LYPLA1P3-201ENST00000402650 695 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 RN7SL492P-201ENST00000460700 295 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC093870.1-201ENST00000506837 213 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 GLYATL1P2-202ENST00000588046 902 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC079949.2-201ENST00000617117 2933 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 C1D-202ENST00000407324 1379 ntTSL 3 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 TVP23CP1-201ENST00000450317 639 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 RNA5SP438-201ENST00000516561 112 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC135983.3-201ENST00000528049 1226 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 FO681491.1-202ENST00000623392 737 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 RNU6-1017P-201ENST00000363613 106 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 SNORA70.3-201ENST00000365075 132 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 RN7SKP62-201ENST00000384539 329 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 PRR13P5-201ENST00000596581 442 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 BUB1P1-201ENST00000603541 607 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 FAM72A-208ENST00000607379 1139 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AL391262.1-201ENST00000556558 1992 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 ZNF806-201ENST00000438300 1774 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AMELX-201ENST00000348912 737 ntTSL 5 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AL445991.1-201ENST00000450381 475 ntBASIC2.03□□□□□ -2.08
SYNE1Q8NF91 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms