Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.6□□□□□ -1.51
CCL1P22362 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.6□□□□□ -1.51
CCL1P22362 RN7SL131P-201ENST00000579043 256 ntBASIC5.6□□□□□ -1.51
CCL1P22362 RPS4XP21-201ENST00000603814 750 ntBASIC5.6□□□□□ -1.51
CCL1P22362 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC5.6□□□□□ -1.51
CCL1P22362 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.6□□□□□ -1.51
CCL1P22362 AC024255.1-201ENST00000614376 102 ntBASIC5.6□□□□□ -1.51
CCL1P22362 U1.41-201ENST00000617626 165 ntBASIC5.6□□□□□ -1.51
CCL1P22362 AC103564.3-201ENST00000621194 220 ntBASIC5.6□□□□□ -1.51
CCL1P22362 RAB28P4-201ENST00000622233 665 ntBASIC5.6□□□□□ -1.51
CCL1P22362 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCL1P22362 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCL1P22362 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCL1P22362 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCL1P22362 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.6□□□□□ -1.51
CCL1P22362 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCL1P22362 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.6□□□□□ -1.51
CCL1P22362 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.6□□□□□ -1.51
CCL1P22362 MAPK10-287ENST00000641217 3037 ntBASIC5.6□□□□□ -1.51
CCL1P22362 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CCL1P22362 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCL1P22362 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.6□□□□□ -1.51
CCL1P22362 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CCL1P22362 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
CCL1P22362 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCL1P22362 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCL1P22362 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CCL1P22362 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCL1P22362 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCL1P22362 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCL1P22362 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CCL1P22362 OR5M2P-202ENST00000641241 4242 ntBASIC5.59□□□□□ -1.51
CCL1P22362 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCL1P22362 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.59□□□□□ -1.51
CCL1P22362 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCL1P22362 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCL1P22362 OR11H13P-201ENST00000359695 979 ntBASIC5.59□□□□□ -1.51
CCL1P22362 RNA5SP35-201ENST00000391257 129 ntBASIC5.59□□□□□ -1.51
CCL1P22362 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.59□□□□□ -1.51
CCL1P22362 AL391419.1-201ENST00000398901 1275 ntBASIC5.59□□□□□ -1.51
CCL1P22362 FDPSP5-201ENST00000399474 1057 ntBASIC5.59□□□□□ -1.51
CCL1P22362 AL451046.1-201ENST00000406097 534 ntBASIC5.59□□□□□ -1.51
CCL1P22362 AL136100.1-201ENST00000407696 330 ntBASIC5.59□□□□□ -1.51
CCL1P22362 HMGA1P8-201ENST00000414130 321 ntBASIC5.59□□□□□ -1.51
CCL1P22362 MTND4LP17-201ENST00000414607 293 ntBASIC5.59□□□□□ -1.51
CCL1P22362 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCL1P22362 AL139184.1-202ENST00000422303 222 ntBASIC5.59□□□□□ -1.51
CCL1P22362 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.59□□□□□ -1.51
CCL1P22362 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.59□□□□□ -1.51
CCL1P22362 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.59□□□□□ -1.51
CCL1P22362 AL022237.1-201ENST00000446663 358 ntBASIC5.59□□□□□ -1.51
CCL1P22362 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.59□□□□□ -1.51
CCL1P22362 CCNJP1-201ENST00000450600 1149 ntBASIC5.59□□□□□ -1.51
CCL1P22362 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.59□□□□□ -1.51
CCL1P22362 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCL1P22362 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCL1P22362 AC114940.1-201ENST00000512162 1265 ntBASIC5.59□□□□□ -1.51
CCL1P22362 AC096661.1-201ENST00000515870 822 ntBASIC5.59□□□□□ -1.51
CCL1P22362 RN7SKP196-201ENST00000516267 345 ntBASIC5.59□□□□□ -1.51
CCL1P22362 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.59□□□□□ -1.51
CCL1P22362 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.59□□□□□ -1.51
CCL1P22362 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.59□□□□□ -1.51
CCL1P22362 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.59□□□□□ -1.51
CCL1P22362 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCL1P22362 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.59□□□□□ -1.51
CCL1P22362 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCL1P22362 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.59□□□□□ -1.51
CCL1P22362 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.59□□□□□ -1.51
CCL1P22362 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.59□□□□□ -1.51
CCL1P22362 AC018558.5-201ENST00000565840 952 ntBASIC5.59□□□□□ -1.51
CCL1P22362 RN7SL689P-201ENST00000577215 297 ntBASIC5.59□□□□□ -1.51
CCL1P22362 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CCL1P22362 FCGR1CP-201ENST00000579737 1127 ntBASIC5.59□□□□□ -1.51
CCL1P22362 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.59□□□□□ -1.51
CCL1P22362 PRELID3BP3-201ENST00000584963 545 ntBASIC5.59□□□□□ -1.51
CCL1P22362 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.59□□□□□ -1.51
CCL1P22362 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.59□□□□□ -1.51
CCL1P22362 FXYD6P1-201ENST00000604857 285 ntBASIC5.59□□□□□ -1.51
CCL1P22362 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.59□□□□□ -1.51
CCL1P22362 SNORD96A-201ENST00000606577 79 ntBASIC5.59□□□□□ -1.51
CCL1P22362 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.59□□□□□ -1.51
CCL1P22362 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCL1P22362 AC018659.2-201ENST00000624690 715 ntBASIC5.59□□□□□ -1.51
CCL1P22362 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
CCL1P22362 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CCL1P22362 AC068769.1-201ENST00000474767 2426 ntBASIC5.59□□□□□ -1.51
CCL1P22362 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCL1P22362 SAGE3P-201ENST00000619800 1635 ntBASIC5.59□□□□□ -1.52
CCL1P22362 AL353763.1-201ENST00000624467 1628 ntBASIC5.59□□□□□ -1.52
CCL1P22362 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCL1P22362 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCL1P22362 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CCL1P22362 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCL1P22362 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CCL1P22362 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.58□□□□□ -1.52
CCL1P22362 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.58□□□□□ -1.52
CCL1P22362 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCL1P22362 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
CCL1P22362 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCL1P22362 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 1398.2 ms