Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CDH3P22223 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.6□□□□□ -1.35
CDH3P22223 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDH3P22223 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.6□□□□□ -1.35
CDH3P22223 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.6□□□□□ -1.35
CDH3P22223 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDH3P22223 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CDH3P22223 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.6□□□□□ -1.35
CDH3P22223 OR2W4P-201ENST00000406496 926 ntBASIC6.6□□□□□ -1.35
CDH3P22223 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.6□□□□□ -1.35
CDH3P22223 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.6□□□□□ -1.35
CDH3P22223 AC017078.1-201ENST00000416146 368 ntBASIC6.6□□□□□ -1.35
CDH3P22223 AC006509.1-201ENST00000420788 634 ntBASIC6.6□□□□□ -1.35
CDH3P22223 AL355994.1-201ENST00000424379 260 ntBASIC6.6□□□□□ -1.35
CDH3P22223 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.6□□□□□ -1.35
CDH3P22223 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.6□□□□□ -1.35
CDH3P22223 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.6□□□□□ -1.35
CDH3P22223 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.6□□□□□ -1.35
CDH3P22223 RN7SL502P-201ENST00000481857 290 ntBASIC6.6□□□□□ -1.35
CDH3P22223 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.6□□□□□ -1.35
CDH3P22223 RPL5P33-201ENST00000487833 905 ntBASIC6.6□□□□□ -1.35
CDH3P22223 RN7SL612P-201ENST00000497704 295 ntBASIC6.6□□□□□ -1.35
CDH3P22223 SNX18P23-201ENST00000510867 677 ntBASIC6.6□□□□□ -1.35
CDH3P22223 MINOS1P4-201ENST00000515470 318 ntBASIC6.6□□□□□ -1.35
CDH3P22223 AC073581.1-201ENST00000519036 575 ntBASIC6.6□□□□□ -1.35
CDH3P22223 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.6□□□□□ -1.35
CDH3P22223 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.6□□□□□ -1.35
CDH3P22223 OR4A21P-201ENST00000532759 944 ntBASIC6.6□□□□□ -1.35
CDH3P22223 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.6□□□□□ -1.35
CDH3P22223 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.6□□□□□ -1.35
CDH3P22223 AP001542.1-201ENST00000591314 200 ntBASIC6.6□□□□□ -1.35
CDH3P22223 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.6□□□□□ -1.35
CDH3P22223 AC036176.3-201ENST00000602456 418 ntBASIC6.6□□□□□ -1.35
CDH3P22223 DIMT1P1-201ENST00000603970 763 ntBASIC6.6□□□□□ -1.35
CDH3P22223 AC026951.2-201ENST00000613847 241 ntBASIC6.6□□□□□ -1.35
CDH3P22223 AP003789.1-201ENST00000617737 605 ntBASIC6.6□□□□□ -1.35
CDH3P22223 AC244100.4-201ENST00000617747 388 ntBASIC6.6□□□□□ -1.35
CDH3P22223 AC127071.2-201ENST00000623293 527 ntBASIC6.6□□□□□ -1.35
CDH3P22223 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.6□□□□□ -1.35
CDH3P22223 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.6□□□□□ -1.35
CDH3P22223 MAPK10-287ENST00000641217 3037 ntBASIC6.6□□□□□ -1.35
CDH3P22223 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CDH3P22223 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH3P22223 AC093297.3-201ENST00000607056 2517 ntBASIC6.59□□□□□ -1.35
CDH3P22223 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CDH3P22223 DDX43P1-201ENST00000510713 1763 ntBASIC6.59□□□□□ -1.35
CDH3P22223 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH3P22223 AC123912.3-201ENST00000600907 1367 ntBASIC6.59□□□□□ -1.35
CDH3P22223 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.59□□□□□ -1.35
CDH3P22223 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CDH3P22223 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CDH3P22223 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CDH3P22223 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CDH3P22223 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH3P22223 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CDH3P22223 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.59□□□□□ -1.35
CDH3P22223 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH3P22223 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.59□□□□□ -1.35
CDH3P22223 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH3P22223 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CDH3P22223 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH3P22223 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.59□□□□□ -1.35
CDH3P22223 MIR551B-201ENST00000384984 96 ntBASIC6.59□□□□□ -1.35
CDH3P22223 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CDH3P22223 AL353133.1-201ENST00000407695 401 ntBASIC6.59□□□□□ -1.35
CDH3P22223 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.59□□□□□ -1.35
CDH3P22223 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CDH3P22223 GAPDHP57-201ENST00000424400 585 ntBASIC6.59□□□□□ -1.35
CDH3P22223 AL589794.1-201ENST00000424971 390 ntBASIC6.59□□□□□ -1.35
CDH3P22223 ETF1P1-206ENST00000427296 984 ntBASIC6.59□□□□□ -1.35
CDH3P22223 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.59□□□□□ -1.35
CDH3P22223 AL356121.1-201ENST00000442911 156 ntBASIC6.59□□□□□ -1.35
CDH3P22223 CEACAMP11-201ENST00000455211 583 ntBASIC6.59□□□□□ -1.35
CDH3P22223 RN7SL70P-201ENST00000478322 302 ntBASIC6.59□□□□□ -1.35
CDH3P22223 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.59□□□□□ -1.35
CDH3P22223 MRPL57P6-201ENST00000506570 309 ntBASIC6.59□□□□□ -1.35
CDH3P22223 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.59□□□□□ -1.35
CDH3P22223 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.59□□□□□ -1.35
CDH3P22223 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.59□□□□□ -1.35
CDH3P22223 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.59□□□□□ -1.35
CDH3P22223 AC087752.2-201ENST00000521219 281 ntBASIC6.59□□□□□ -1.35
CDH3P22223 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CDH3P22223 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.59□□□□□ -1.35
CDH3P22223 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.59□□□□□ -1.35
CDH3P22223 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.59□□□□□ -1.35
CDH3P22223 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.59□□□□□ -1.35
CDH3P22223 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.59□□□□□ -1.35
CDH3P22223 AC024267.2-201ENST00000582737 417 ntBASIC6.59□□□□□ -1.35
CDH3P22223 AC087575.1-201ENST00000585087 229 ntBASIC6.59□□□□□ -1.35
CDH3P22223 AC010463.3-201ENST00000594077 500 ntBASIC6.59□□□□□ -1.35
CDH3P22223 AC012254.5-201ENST00000623573 478 ntBASIC6.59□□□□□ -1.35
CDH3P22223 CLUHP10-201ENST00000631979 980 ntBASIC6.59□□□□□ -1.35
CDH3P22223 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.59□□□□□ -1.35
CDH3P22223 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CDH3P22223 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
CDH3P22223 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.35
CDH3P22223 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH3P22223 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDH3P22223 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.59□□□□□ -1.35
CDH3P22223 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms