Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNU1-24P-201ENST00000364285 165 ntBASIC6.24□□□□□ -1.41
COL5A1P20908 AC087752.1-201ENST00000391360 558 ntBASIC6.24□□□□□ -1.41
COL5A1P20908 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.24□□□□□ -1.41
COL5A1P20908 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
COL5A1P20908 RPL7AP14-201ENST00000424041 802 ntBASIC6.24□□□□□ -1.41
COL5A1P20908 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.24□□□□□ -1.41
COL5A1P20908 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.24□□□□□ -1.41
COL5A1P20908 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.24□□□□□ -1.41
COL5A1P20908 HLA-DPA3-207ENST00000454398 229 ntBASIC6.24□□□□□ -1.41
COL5A1P20908 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.24□□□□□ -1.41
COL5A1P20908 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.24□□□□□ -1.41
COL5A1P20908 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A1P20908 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.24□□□□□ -1.41
COL5A1P20908 AC036111.2-201ENST00000533247 901 ntBASIC6.24□□□□□ -1.41
COL5A1P20908 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.24□□□□□ -1.41
COL5A1P20908 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A1P20908 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.24□□□□□ -1.41
COL5A1P20908 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.24□□□□□ -1.41
COL5A1P20908 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.24□□□□□ -1.41
COL5A1P20908 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A1P20908 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A1P20908 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A1P20908 AC125238.2-201ENST00000430003 1440 ntBASIC6.24□□□□□ -1.41
COL5A1P20908 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A1P20908 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A1P20908 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.24□□□□□ -1.41
COL5A1P20908 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A1P20908 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.24□□□□□ -1.41
COL5A1P20908 AC007993.1-201ENST00000621298 2430 ntBASIC6.24□□□□□ -1.41
COL5A1P20908 CLCA3P-203ENST00000490028 2781 ntBASIC6.24□□□□□ -1.41
COL5A1P20908 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A1P20908 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A1P20908 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
COL5A1P20908 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A1P20908 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A1P20908 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A1P20908 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL5A1P20908 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
COL5A1P20908 AL139384.2-201ENST00000613809 3590 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.23□□□□□ -1.41
COL5A1P20908 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.23□□□□□ -1.41
COL5A1P20908 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.23□□□□□ -1.41
COL5A1P20908 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 RNA5SP477-201ENST00000362639 119 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
COL5A1P20908 RN7SKP281-201ENST00000410472 352 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.23□□□□□ -1.41
COL5A1P20908 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.23□□□□□ -1.41
COL5A1P20908 RPS14P4-201ENST00000415880 418 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.23□□□□□ -1.41
COL5A1P20908 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.23□□□□□ -1.41
COL5A1P20908 IGLV3-4-201ENST00000432300 244 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.23□□□□□ -1.41
COL5A1P20908 SBDSP1-204ENST00000453858 737 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.23□□□□□ -1.41
COL5A1P20908 AC023194.2-201ENST00000465398 406 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 AC022415.1-202ENST00000486612 523 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 RPL12P30-201ENST00000488389 499 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 MTATP6P1-201ENST00000514057 681 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.23□□□□□ -1.41
COL5A1P20908 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.23□□□□□ -1.41
COL5A1P20908 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.23□□□□□ -1.41
COL5A1P20908 AC092375.1-201ENST00000550410 637 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.23□□□□□ -1.41
COL5A1P20908 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.23□□□□□ -1.41
COL5A1P20908 RN7SL475P-201ENST00000583379 298 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.23□□□□□ -1.41
COL5A1P20908 OR7E18P-201ENST00000592589 702 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 AC100767.2-201ENST00000604840 693 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.23□□□□□ -1.41
COL5A1P20908 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 AP005431.1-201ENST00000618479 319 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.23□□□□□ -1.41
COL5A1P20908 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
COL5A1P20908 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
COL5A1P20908 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC6.23□□□□□ -1.41
COL5A1P20908 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.23□□□□□ -1.41
COL5A1P20908 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.23□□□□□ -1.41
COL5A1P20908 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
COL5A1P20908 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
COL5A1P20908 AC105114.1-201ENST00000624795 1862 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
COL5A1P20908 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 AC027575.3-201ENST00000583058 2747 ntBASIC6.23□□□□□ -1.41
COL5A1P20908 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
COL5A1P20908 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
COL5A1P20908 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL5A1P20908 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms