Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC7.09□□□□□ -1.27
COL6A2P12110 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC7.09□□□□□ -1.27
COL6A2P12110 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL6A2P12110 EEF1B2P1-201ENST00000567221 672 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC7.09□□□□□ -1.27
COL6A2P12110 EIF1P5-201ENST00000585002 234 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC7.09□□□□□ -1.27
COL6A2P12110 AC097641.3-201ENST00000613523 464 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 AC110769.3-201ENST00000624567 1173 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 AL355480.4-201ENST00000626823 69 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.09□□□□□ -1.27
COL6A2P12110 AC068620.4-201ENST00000636730 1182 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.09□□□□□ -1.27
COL6A2P12110 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.09□□□□□ -1.27
COL6A2P12110 AP003175.1-201ENST00000641383 6658 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL6A2P12110 AC007993.1-201ENST00000621298 2430 ntBASIC7.09□□□□□ -1.27
COL6A2P12110 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL6A2P12110 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL6A2P12110 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL6A2P12110 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.09□□□□□ -1.28
COL6A2P12110 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC7.09□□□□□ -1.28
COL6A2P12110 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
COL6A2P12110 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.28
COL6A2P12110 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
COL6A2P12110 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.08□□□□□ -1.28
COL6A2P12110 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.08□□□□□ -1.28
COL6A2P12110 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 AC017002.4-201ENST00000604721 1525 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.08□□□□□ -1.28
COL6A2P12110 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.08□□□□□ -1.28
COL6A2P12110 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
COL6A2P12110 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.08□□□□□ -1.28
COL6A2P12110 AC112243.1-201ENST00000623949 3851 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 WBP11P1-201ENST00000562560 1931 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.08□□□□□ -1.28
COL6A2P12110 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
COL6A2P12110 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 SNORA73B-201ENST00000363217 204 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 RN7SKP28-201ENST00000364770 305 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 MIR181C-201ENST00000384881 110 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
COL6A2P12110 AL589994.1-201ENST00000404962 340 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 RNU4-27P-201ENST00000410889 139 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC7.08□□□□□ -1.28
COL6A2P12110 TMA16P2-201ENST00000413187 601 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 MTATP6P20-201ENST00000414147 562 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 AL158050.1-201ENST00000416077 457 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 OR2X1P-201ENST00000421144 687 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.08□□□□□ -1.28
COL6A2P12110 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC7.08□□□□□ -1.28
COL6A2P12110 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC7.08□□□□□ -1.28
COL6A2P12110 GYG1P2-201ENST00000426437 1006 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC7.08□□□□□ -1.28
COL6A2P12110 PTP4A1P3-201ENST00000433661 420 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC7.08□□□□□ -1.28
COL6A2P12110 AL355355.1-201ENST00000442900 793 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 AL031313.1-201ENST00000448435 256 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC7.08□□□□□ -1.28
COL6A2P12110 BZW1P1-201ENST00000454901 1240 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.08□□□□□ -1.28
COL6A2P12110 AC008040.4-201ENST00000494834 768 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 AC097263.1-201ENST00000496795 606 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 AC008427.1-201ENST00000503102 655 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 OR7E163P-201ENST00000505943 894 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 SUMO2P5-201ENST00000506790 245 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 AC112518.2-201ENST00000508565 425 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC7.08□□□□□ -1.28
COL6A2P12110 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC7.08□□□□□ -1.28
COL6A2P12110 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC7.08□□□□□ -1.28
COL6A2P12110 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.08□□□□□ -1.28
COL6A2P12110 AC087257.2-201ENST00000538759 928 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC7.08□□□□□ -1.28
COL6A2P12110 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.08□□□□□ -1.28
COL6A2P12110 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC7.08□□□□□ -1.28
COL6A2P12110 RPS7P1-201ENST00000571702 585 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC7.08□□□□□ -1.28
COL6A2P12110 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.08□□□□□ -1.28
COL6A2P12110 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC7.08□□□□□ -1.28
COL6A2P12110 AC108451.2-201ENST00000603875 538 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 AC026741.1-201ENST00000605892 482 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.08□□□□□ -1.28
COL6A2P12110 OR6L2P-201ENST00000608207 925 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.08□□□□□ -1.28
COL6A2P12110 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL6A2P12110 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC7.08□□□□□ -1.28
COL6A2P12110 MIR6807-201ENST00000621968 92 ntBASIC7.08□□□□□ -1.28
COL6A2P12110 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms