Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5□□□□□ -1.61
CXCL1P09341 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC5□□□□□ -1.61
CXCL1P09341 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC5□□□□□ -1.61
CXCL1P09341 OR4F8P-201ENST00000589943 937 ntBASIC5□□□□□ -1.61
CXCL1P09341 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC5□□□□□ -1.61
CXCL1P09341 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC5□□□□□ -1.61
CXCL1P09341 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5□□□□□ -1.61
CXCL1P09341 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5□□□□□ -1.61
CXCL1P09341 AC004241.2-201ENST00000614562 444 ntBASIC5□□□□□ -1.61
CXCL1P09341 RN7SL126P-201ENST00000616400 299 ntBASIC5□□□□□ -1.61
CXCL1P09341 AL669830.1-201ENST00000621457 656 ntBASIC5□□□□□ -1.61
CXCL1P09341 AL353608.4-201ENST00000624487 1188 ntBASIC5□□□□□ -1.61
CXCL1P09341 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5□□□□□ -1.61
CXCL1P09341 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5□□□□□ -1.61
CXCL1P09341 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CXCL1P09341 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5□□□□□ -1.61
CXCL1P09341 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CXCL1P09341 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5□□□□□ -1.61
CXCL1P09341 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5□□□□□ -1.61
CXCL1P09341 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CXCL1P09341 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5□□□□□ -1.61
CXCL1P09341 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CXCL1P09341 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CXCL1P09341 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5□□□□□ -1.61
CXCL1P09341 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CXCL1P09341 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC4.99□□□□□ -1.61
CXCL1P09341 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC4.99□□□□□ -1.61
CXCL1P09341 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC4.99□□□□□ -1.61
CXCL1P09341 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.99□□□□□ -1.61
CXCL1P09341 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CXCL1P09341 AL451061.1-201ENST00000407887 862 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC4.99□□□□□ -1.61
CXCL1P09341 BX276092.6-201ENST00000430476 250 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 MYL6P3-201ENST00000436904 432 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC4.99□□□□□ -1.61
CXCL1P09341 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.99□□□□□ -1.61
CXCL1P09341 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC4.99□□□□□ -1.61
CXCL1P09341 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.99□□□□□ -1.61
CXCL1P09341 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC4.99□□□□□ -1.61
CXCL1P09341 AL354714.5-201ENST00000450131 590 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 BX276092.8-201ENST00000455722 250 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 NMNAT1P3-201ENST00000457517 888 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 RN7SL187P-201ENST00000495587 303 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 CHCHD2P7-201ENST00000508008 452 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
CXCL1P09341 RPS20-202ENST00000518875 671 ntTSL 2 BASIC4.99□□□□□ -1.61
CXCL1P09341 IGLVI-70-201ENST00000523272 390 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC4.99□□□□□ -1.61
CXCL1P09341 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC4.99□□□□□ -1.61
CXCL1P09341 PHBP2-201ENST00000532859 806 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC4.99□□□□□ -1.61
CXCL1P09341 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CXCL1P09341 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.99□□□□□ -1.61
CXCL1P09341 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC4.99□□□□□ -1.61
CXCL1P09341 AC233702.7-202ENST00000582941 211 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC4.99□□□□□ -1.61
CXCL1P09341 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.99□□□□□ -1.61
CXCL1P09341 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC4.99□□□□□ -1.61
CXCL1P09341 AC090241.1-201ENST00000587732 621 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.99□□□□□ -1.61
CXCL1P09341 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC4.99□□□□□ -1.61
CXCL1P09341 AC004908.1-201ENST00000606572 541 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC4.99□□□□□ -1.61
CXCL1P09341 PART1_3.1-201ENST00000619680 131 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 AC090099.1-204ENST00000623626 849 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC4.99□□□□□ -1.61
CXCL1P09341 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
CXCL1P09341 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
CXCL1P09341 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CXCL1P09341 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 AP002800.1-201ENST00000624982 2225 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 OR9K1P-202ENST00000641111 3217 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 AC010329.1-201ENST00000593903 8328 ntBASIC4.99□□□□□ -1.61
CXCL1P09341 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CXCL1P09341 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CXCL1P09341 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
CXCL1P09341 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL1P09341 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL1P09341 RPS2P45-201ENST00000469997 2057 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL1P09341 BIN2P1-201ENST00000504996 1530 ntBASIC4.98□□□□□ -1.61
CXCL1P09341 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CXCL1P09341 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL1P09341 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CXCL1P09341 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms