Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL590617.1-201ENST00000405630 748 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 RN7SKP127-201ENST00000410443 354 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 PIGPP2-201ENST00000411569 458 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AL590806.1-201ENST00000415818 853 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AC245052.5-201ENST00000416320 649 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 UBTFL3-201ENST00000418934 1024 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 CDC42P6-201ENST00000421246 576 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AL050321.1-201ENST00000432363 400 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AL109810.1-201ENST00000435008 495 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AC012501.2-201ENST00000437634 1281 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AC098614.3-201ENST00000438957 440 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 COX6CP12-201ENST00000446748 202 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AC093166.3-201ENST00000448785 303 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 OR9M1P-201ENST00000459641 921 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 RPS4XP12-201ENST00000461747 709 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 CENPS-202ENST00000462462 584 ntTSL 3 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AC026798.1-201ENST00000468490 482 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 UBTFL6-201ENST00000477929 1024 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 FTH1P4-201ENST00000480365 553 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 LINC00544-202ENST00000481738 575 ntTSL 3 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AF250324.1-204ENST00000501825 841 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AC024451.1-201ENST00000508013 779 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 RFPL4AP3-201ENST00000515267 345 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 IGHV3-63-201ENST00000518422 341 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AP000873.3-201ENST00000531869 766 ntTSL 5 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AP000866.3-201ENST00000534607 433 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 PCED1B-AS1-205ENST00000548222 625 ntTSL 3 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AC089984.2-201ENST00000550293 1201 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AL121579.1-201ENST00000555129 305 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 LINC02124-201ENST00000570087 484 ntTSL 2 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AC006557.4-201ENST00000585516 830 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AC020907.2-202ENST00000592174 728 ntTSL 3 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AP002505.1-201ENST00000592655 228 ntTSL 5 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AL159169.3-201ENST00000608871 561 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AL445670.1-201ENST00000618889 801 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 AC015726.3-201ENST00000624501 418 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 LINC00294-201ENST00000631190 3306 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 CCDC162P-202ENST00000368966 6751 ntBASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC7.87□□□□□ -1.15
DEPDC4Q8N2C3 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 MASP1-202ENST00000296280 4015 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AC018880.1-201ENST00000418898 1319 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AC133561.2-202ENST00000561642 1301 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AL023806.3-201ENST00000638502 2704 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 KIAA1328-203ENST00000586501 1577 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AC019072.1-201ENST00000604535 1551 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 SNORA58.1-201ENST00000364133 136 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 CENPW-201ENST00000368325 528 ntTSL 3 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 BPIFA1-202ENST00000375413 1026 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 Y_RNA.390-201ENST00000383932 102 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 Metazoa_SRP.7-201ENST00000392674 281 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 FTH1P3-201ENST00000394290 584 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 IL6-203ENST00000401651 539 ntTSL 2 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 U3.33-201ENST00000408117 204 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 GEMIN6-203ENST00000409566 834 ntTSL 2 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 ATG4AP1-201ENST00000416893 538 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 BLOC1S2P1-201ENST00000428431 301 ntBASIC7.86□□□□□ -1.15
DEPDC4Q8N2C3 CHCHD4P2-201ENST00000431135 420 ntBASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms