Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 AC011352.2-201ENST00000514574 1016 ntBASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 AC011500.1-201ENST00000601963 469 ntBASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 PSMC1P6-201ENST00000477233 1319 ntBASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 PSMC1P4-201ENST00000515236 1327 ntBASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.2□□□□□ -1.42
H3F3CQ6NXT2 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 AL359694.1-201ENST00000403247 604 ntBASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 RPS21P8-201ENST00000413365 247 ntBASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 TRGV5P-201ENST00000419915 354 ntBASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 AC245291.3-201ENST00000443400 292 ntBASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 OR52E7P-201ENST00000452394 933 ntBASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 AC122713.1-201ENST00000518368 1015 ntBASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 AP003033.2-201ENST00000528901 805 ntBASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 AC026956.1-201ENST00000558741 396 ntBASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 RN7SL199P-201ENST00000578752 281 ntBASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 RN7SL656P-201ENST00000579044 281 ntBASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 RN7SL404P-201ENST00000582421 281 ntBASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 NDUFB9P1-201ENST00000604683 510 ntBASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 AL359091.2-201ENST00000609303 556 ntBASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 AL008582.1-201ENST00000609612 442 ntBASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 RACGAP1P-201ENST00000550663 1879 ntBASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 BRD7P1-201ENST00000557705 1915 ntBASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
H3F3CQ6NXT2 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 RN7SKP250-201ENST00000363924 321 ntBASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 MRPS6P2-201ENST00000381143 370 ntBASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 RN7SKP188-201ENST00000410789 317 ntBASIC6.18□□□□□ -1.42
H3F3CQ6NXT2 MRPS21P5-201ENST00000417885 231 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms