Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
NR1H2P55055 IGKV2-29-201ENST00000521304 372 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.53□□□□□ -1.36
NR1H2P55055 AC005000.1-201ENST00000536192 288 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.53□□□□□ -1.36
NR1H2P55055 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.53□□□□□ -1.36
NR1H2P55055 AL591767.3-201ENST00000554632 525 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.53□□□□□ -1.36
NR1H2P55055 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC6.53□□□□□ -1.36
NR1H2P55055 AC027796.1-201ENST00000575593 512 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.53□□□□□ -1.36
NR1H2P55055 AC087575.1-201ENST00000585087 229 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 AL078624.2-201ENST00000605063 554 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 AC012640.3-201ENST00000607847 430 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.53□□□□□ -1.36
NR1H2P55055 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 AC007671.1-201ENST00000616957 830 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 RN7SL680P-201ENST00000620379 299 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NR1H2P55055 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
NR1H2P55055 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NR1H2P55055 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.53□□□□□ -1.36
NR1H2P55055 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NR1H2P55055 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NR1H2P55055 DDX10P2-201ENST00000417796 2614 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 DDX18P6-201ENST00000450119 1997 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NR1H2P55055 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
NR1H2P55055 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.53□□□□□ -1.36
NR1H2P55055 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
NR1H2P55055 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NR1H2P55055 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.52□□□□□ -1.37
NR1H2P55055 AL391380.1-201ENST00000439300 1432 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NR1H2P55055 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NR1H2P55055 AC092111.2-201ENST00000611627 1414 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 AC006511.3-201ENST00000624929 1783 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NR1H2P55055 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
NR1H2P55055 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.52□□□□□ -1.37
NR1H2P55055 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
NR1H2P55055 BX284613.1-201ENST00000452221 1641 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.52□□□□□ -1.37
NR1H2P55055 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
NR1H2P55055 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
NR1H2P55055 STAG3L4-201ENST00000352103 530 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NR1H2P55055 RNU6-670P-201ENST00000364312 104 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 RNA5SP396-201ENST00000364834 120 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
NR1H2P55055 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.52□□□□□ -1.37
NR1H2P55055 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.52□□□□□ -1.37
NR1H2P55055 TYMSP1-201ENST00000407851 869 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 RN7SKP137-201ENST00000411074 307 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.52□□□□□ -1.37
NR1H2P55055 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.52□□□□□ -1.37
NR1H2P55055 FTOP1-201ENST00000419363 861 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.52□□□□□ -1.37
NR1H2P55055 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.52□□□□□ -1.37
NR1H2P55055 AC245884.2-201ENST00000426257 404 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.52□□□□□ -1.37
NR1H2P55055 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.52□□□□□ -1.37
NR1H2P55055 AC244505.2-201ENST00000435089 759 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 DNAJC19P5-201ENST00000443295 316 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 LIN28AP2-201ENST00000445283 458 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 RPL24P8-201ENST00000446071 474 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.52□□□□□ -1.37
NR1H2P55055 AL451074.4-201ENST00000447545 470 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 CDC42P2-201ENST00000448566 569 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 PRDX1P1-201ENST00000449329 596 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 SLAMF6P1-201ENST00000451067 602 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.52□□□□□ -1.37
NR1H2P55055 LINC01053-201ENST00000457628 771 ntTSL 2 BASIC6.52□□□□□ -1.37
NR1H2P55055 AC117395.2-201ENST00000463122 1128 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 AC135721.2-201ENST00000464237 300 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.52□□□□□ -1.37
NR1H2P55055 AC009153.1-201ENST00000485799 496 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 AC105420.1-201ENST00000504389 582 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 AC233724.10-201ENST00000510454 409 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.52□□□□□ -1.37
NR1H2P55055 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.52□□□□□ -1.37
NR1H2P55055 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.52□□□□□ -1.37
NR1H2P55055 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC6.52□□□□□ -1.37
NR1H2P55055 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC6.52□□□□□ -1.37
NR1H2P55055 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.52□□□□□ -1.37
NR1H2P55055 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.52□□□□□ -1.37
NR1H2P55055 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.52□□□□□ -1.37
NR1H2P55055 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.52□□□□□ -1.37
NR1H2P55055 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.52□□□□□ -1.37
NR1H2P55055 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.52□□□□□ -1.37
NR1H2P55055 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.52□□□□□ -1.37
NR1H2P55055 AC006116.6-201ENST00000593258 1103 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.52□□□□□ -1.37
NR1H2P55055 AL390058.1-201ENST00000603834 629 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 AC108451.2-201ENST00000603875 538 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 AC004852.1-201ENST00000605206 154 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 AC106782.7-201ENST00000624024 418 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 AC133555.5-201ENST00000624430 418 ntBASIC6.52□□□□□ -1.37
NR1H2P55055 AC022743.1-201ENST00000624990 664 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms