Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC096743.1-201ENST00000485172 319 ntBASIC6.62□□□□□ -1.35
CDH3P22223 AC009567.2-201ENST00000502989 349 ntBASIC6.62□□□□□ -1.35
CDH3P22223 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.62□□□□□ -1.35
CDH3P22223 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.62□□□□□ -1.35
CDH3P22223 EEF1B2P2-201ENST00000519625 676 ntBASIC6.62□□□□□ -1.35
CDH3P22223 AP004607.6-201ENST00000525033 1202 ntBASIC6.62□□□□□ -1.35
CDH3P22223 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.62□□□□□ -1.35
CDH3P22223 ULK4P1-202ENST00000565174 503 ntBASIC6.62□□□□□ -1.35
CDH3P22223 AC020914.7-201ENST00000594477 545 ntBASIC6.62□□□□□ -1.35
CDH3P22223 AC111186.1-201ENST00000604684 130 ntBASIC6.62□□□□□ -1.35
CDH3P22223 AC004908.1-201ENST00000606572 541 ntBASIC6.62□□□□□ -1.35
CDH3P22223 AC016252.1-201ENST00000609721 474 ntBASIC6.62□□□□□ -1.35
CDH3P22223 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDH3P22223 AL137000.1-201ENST00000610528 1244 ntBASIC6.62□□□□□ -1.35
CDH3P22223 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.62□□□□□ -1.35
CDH3P22223 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDH3P22223 AC021422.1-201ENST00000621212 473 ntBASIC6.62□□□□□ -1.35
CDH3P22223 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDH3P22223 AC025287.2-201ENST00000621911 668 ntBASIC6.62□□□□□ -1.35
CDH3P22223 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CDH3P22223 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.62□□□□□ -1.35
CDH3P22223 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDH3P22223 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.62□□□□□ -1.35
CDH3P22223 AP004289.1-201ENST00000436307 2205 ntBASIC6.62□□□□□ -1.35
CDH3P22223 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.62□□□□□ -1.35
CDH3P22223 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDH3P22223 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDH3P22223 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDH3P22223 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.62□□□□□ -1.35
CDH3P22223 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDH3P22223 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDH3P22223 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDH3P22223 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.61□□□□□ -1.35
CDH3P22223 AL451064.2-201ENST00000623514 1654 ntBASIC6.61□□□□□ -1.35
CDH3P22223 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CDH3P22223 AL512329.1-201ENST00000404600 1592 ntBASIC6.61□□□□□ -1.35
CDH3P22223 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.61□□□□□ -1.35
CDH3P22223 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH3P22223 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH3P22223 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH3P22223 MKI67P1-201ENST00000604297 1460 ntBASIC6.61□□□□□ -1.35
CDH3P22223 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
CDH3P22223 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.61□□□□□ -1.35
CDH3P22223 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH3P22223 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH3P22223 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH3P22223 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH3P22223 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.61□□□□□ -1.35
CDH3P22223 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CDH3P22223 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.61□□□□□ -1.35
CDH3P22223 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.61□□□□□ -1.35
CDH3P22223 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH3P22223 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH3P22223 RN7SKP184-201ENST00000362348 333 ntBASIC6.61□□□□□ -1.35
CDH3P22223 RNA5SP382-201ENST00000363355 112 ntBASIC6.61□□□□□ -1.35
CDH3P22223 RNA5SP514-201ENST00000363717 111 ntBASIC6.61□□□□□ -1.35
CDH3P22223 RN7SKP191-201ENST00000364713 306 ntBASIC6.61□□□□□ -1.35
CDH3P22223 ARSFP1-201ENST00000398758 477 ntBASIC6.61□□□□□ -1.35
CDH3P22223 MIR1266-201ENST00000408125 84 ntBASIC6.61□□□□□ -1.35
CDH3P22223 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.61□□□□□ -1.35
CDH3P22223 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.61□□□□□ -1.35
CDH3P22223 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.61□□□□□ -1.35
CDH3P22223 AHCYP8-201ENST00000425108 209 ntBASIC6.61□□□□□ -1.35
CDH3P22223 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.61□□□□□ -1.35
CDH3P22223 AP003385.1-201ENST00000426387 893 ntBASIC6.61□□□□□ -1.35
CDH3P22223 AL022324.2-201ENST00000434827 780 ntBASIC6.61□□□□□ -1.35
CDH3P22223 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.61□□□□□ -1.35
CDH3P22223 AC234771.4-201ENST00000441416 730 ntBASIC6.61□□□□□ -1.35
CDH3P22223 PA2G4P1-201ENST00000442248 1197 ntBASIC6.61□□□□□ -1.35
CDH3P22223 WDR82P2-201ENST00000444540 928 ntBASIC6.61□□□□□ -1.35
CDH3P22223 RPL7AP71-201ENST00000451120 739 ntBASIC6.61□□□□□ -1.35
CDH3P22223 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.61□□□□□ -1.35
CDH3P22223 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CDH3P22223 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.61□□□□□ -1.35
CDH3P22223 RPS10P20-201ENST00000494130 463 ntBASIC6.61□□□□□ -1.35
CDH3P22223 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.61□□□□□ -1.35
CDH3P22223 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.61□□□□□ -1.35
CDH3P22223 AC139713.1-202ENST00000512366 460 ntBASIC6.61□□□□□ -1.35
CDH3P22223 AC010442.1-201ENST00000515583 816 ntBASIC6.61□□□□□ -1.35
CDH3P22223 AC093878.1-201ENST00000515630 432 ntBASIC6.61□□□□□ -1.35
CDH3P22223 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.61□□□□□ -1.35
CDH3P22223 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.61□□□□□ -1.35
CDH3P22223 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH3P22223 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.61□□□□□ -1.35
CDH3P22223 RN7SL66P-201ENST00000582099 264 ntBASIC6.61□□□□□ -1.35
CDH3P22223 AC067852.5-201ENST00000589299 310 ntBASIC6.61□□□□□ -1.35
CDH3P22223 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.61□□□□□ -1.35
CDH3P22223 AC005479.3-201ENST00000602790 431 ntBASIC6.61□□□□□ -1.35
CDH3P22223 RPS4XP21-201ENST00000603814 750 ntBASIC6.61□□□□□ -1.35
CDH3P22223 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.61□□□□□ -1.35
CDH3P22223 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CDH3P22223 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CDH3P22223 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH3P22223 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDH3P22223 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
CDH3P22223 AC130360.2-201ENST00000533477 1556 ntBASIC6.61□□□□□ -1.35
CDH3P22223 AC092701.1-201ENST00000623627 1551 ntBASIC6.61□□□□□ -1.35
CDH3P22223 AL137058.3-201ENST00000624531 3099 ntBASIC6.61□□□□□ -1.35
CDH3P22223 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CDH3P22223 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms