Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-DOAP06340 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-DOAP06340 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-DOAP06340 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-DOAP06340 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-DOAP06340 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HLA-DOAP06340 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.81□□□□□ -1.16
HLA-DOAP06340 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
HLA-DOAP06340 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-DOAP06340 AC119674.1-204ENST00000641348 1343 ntBASIC7.8□□□□□ -1.16
HLA-DOAP06340 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-DOAP06340 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-DOAP06340 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-DOAP06340 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-DOAP06340 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC7.8□□□□□ -1.16
HLA-DOAP06340 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.8□□□□□ -1.16
HLA-DOAP06340 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.8□□□□□ -1.16
HLA-DOAP06340 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-DOAP06340 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.8□□□□□ -1.16
HLA-DOAP06340 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-DOAP06340 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-DOAP06340 VN1R20P-201ENST00000425215 966 ntBASIC7.8□□□□□ -1.16
HLA-DOAP06340 AC002069.1-201ENST00000429649 1159 ntBASIC7.8□□□□□ -1.16
HLA-DOAP06340 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.8□□□□□ -1.16
HLA-DOAP06340 GTF3AP6-201ENST00000432585 986 ntBASIC7.8□□□□□ -1.16
HLA-DOAP06340 CCNJP2-201ENST00000457810 1163 ntBASIC7.8□□□□□ -1.16
HLA-DOAP06340 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
HLA-DOAP06340 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.8□□□□□ -1.16
HLA-DOAP06340 H3F3AP3-201ENST00000497682 407 ntBASIC7.8□□□□□ -1.16
HLA-DOAP06340 AC018645.1-201ENST00000505003 109 ntBASIC7.8□□□□□ -1.16
HLA-DOAP06340 AC092375.1-201ENST00000550410 637 ntBASIC7.8□□□□□ -1.16
HLA-DOAP06340 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.8□□□□□ -1.16
HLA-DOAP06340 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.8□□□□□ -1.16
HLA-DOAP06340 AC122134.1-202ENST00000569111 1201 ntBASIC7.8□□□□□ -1.16
HLA-DOAP06340 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.8□□□□□ -1.16
HLA-DOAP06340 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.8□□□□□ -1.16
HLA-DOAP06340 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.8□□□□□ -1.16
HLA-DOAP06340 AC111152.1-202ENST00000635848 339 ntBASIC7.8□□□□□ -1.16
HLA-DOAP06340 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-DOAP06340 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-DOAP06340 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
HLA-DOAP06340 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
HLA-DOAP06340 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-DOAP06340 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-DOAP06340 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-DOAP06340 EIF3EP2-201ENST00000423042 1814 ntBASIC7.8□□□□□ -1.16
HLA-DOAP06340 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.8□□□□□ -1.16
HLA-DOAP06340 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HLA-DOAP06340 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC022613.3-201ENST00000560740 1346 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC087392.3-202ENST00000358446 1754 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 MTCO1P25-201ENST00000414449 1799 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 ENO1P4-201ENST00000416471 1785 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 AL355974.1-201ENST00000618896 1708 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 NPM1P10-201ENST00000398310 865 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC096537.2-201ENST00000413707 714 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC083862.1-201ENST00000427378 1242 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 FTH1P10-202ENST00000430907 550 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 YWHABP1-201ENST00000445359 727 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 COX4I1P2-201ENST00000447446 547 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC117395.1-201ENST00000487390 403 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 RN7SL362P-201ENST00000494228 267 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC139272.1-201ENST00000505516 640 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC112484.3-201ENST00000505910 329 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC131392.1-201ENST00000506490 633 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC095057.1-201ENST00000507583 168 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 RNU6-551P-201ENST00000516661 103 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 AP003168.1-201ENST00000530091 307 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 AC026898.1-201ENST00000586404 571 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 AL589863.1-201ENST00000595383 631 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.79□□□□□ -1.16
HLA-DOAP06340 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.79□□□□□ -1.16
HLA-DOAP06340 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
HLA-DOAP06340 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms