Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AL451046.1-201ENST00000406097 534 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 MTND1P10-201ENST00000426108 832 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 RN7SL390P-201ENST00000470634 284 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 RN7SL165P-201ENST00000477476 291 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 RPL7AP30-201ENST00000482859 796 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 PPP1R11P1-201ENST00000486095 376 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 RPL23AP80-201ENST00000495605 424 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 RN7SL143P-201ENST00000496780 297 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AC105391.1-201ENST00000503155 1045 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AC017007.1-201ENST00000511960 415 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AP005902.2-201ENST00000518393 307 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 RBMS2P1-201ENST00000525031 1226 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 KCTD9P4-201ENST00000526766 1166 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 PPIAP6-201ENST00000557078 499 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 NQO1-205ENST00000561500 891 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 RN7SL270P-201ENST00000579643 281 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 CTSLP2-201ENST00000580501 394 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 DIMT1P1-201ENST00000603970 763 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AL031658.2-201ENST00000616850 651 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 MRPL57P3-201ENST00000619218 176 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AP003108.4-201ENST00000623917 878 ntBASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DRB4X5D2U9 AL136531.3-201ENST00000624378 3658 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 NEK2P4-201ENST00000425793 1329 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AL512310.3-201ENST00000547023 1335 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC096992.2-201ENST00000609553 1684 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 RPL24P4-201ENST00000326586 421 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 RNU1-55P-201ENST00000365510 158 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 EEF1GP6-201ENST00000402309 905 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 YWHAZP5-201ENST00000419975 730 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC245452.2-201ENST00000435222 392 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 CHCHD4P5-201ENST00000436684 427 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 SCDP1-201ENST00000455244 1081 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC073648.3-201ENST00000504939 925 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC087752.2-201ENST00000521219 281 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC090115.2-201ENST00000548060 883 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC004232.1-201ENST00000571388 208 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 RN7SL131P-201ENST00000579043 256 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 MIR8082-201ENST00000612488 81 ntBASIC5.03□□□□□ -1.6
HLA-DRB4X5D2U9 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms