Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 UGT2B27P-201ENST00000505092 1620 ntBASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 RNA5SP115-201ENST00000411160 107 ntBASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 AC002069.1-201ENST00000429649 1159 ntBASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 IGKV1OR10-1-201ENST00000442306 329 ntBASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 CXCR2P1-202ENST00000443392 1074 ntBASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 CCNJP2-201ENST00000457810 1163 ntBASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 IGKV1OR22-5-201ENST00000458718 354 ntBASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 RN7SL168P-201ENST00000463821 279 ntBASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 AC006058.1-201ENST00000568686 5067 ntBASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 AC025809.2-201ENST00000625085 1802 ntBASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 BIN2P1-201ENST00000504996 1530 ntBASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 AC127070.3-201ENST00000503695 3263 ntBASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
KIAA1549Q9HCM3 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC013488.1-201ENST00000526618 1838 ntBASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC011455.2-201ENST00000599320 3336 ntBASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AL391419.1-201ENST00000398901 1275 ntBASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 VN1R12P-201ENST00000403778 876 ntBASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 RNA5SP431-201ENST00000410312 120 ntBASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 GTF2IP14-201ENST00000441415 586 ntBASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 MGAT2P1-201ENST00000449718 797 ntBASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC010325.3-201ENST00000641084 394 ntBASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 USP3-201ENST00000268049 5311 ntTSL 5 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 OR2AH1P-202ENST00000641232 2744 ntBASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 MROH3P-201ENST00000435735 2676 ntBASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 MIR188-201ENST00000385034 86 ntBASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 CYCSP52-201ENST00000422857 310 ntBASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC113367.2-201ENST00000505749 160 ntBASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.86□□□□□ -1.47
KIAA1549Q9HCM3 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms