Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 SNORA11D-201ENST00000408548 128 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 SNORA11E-201ENST00000408778 128 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 TRIM60P5Y-201ENST00000413946 574 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC127537.1-201ENST00000418183 748 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC013268.2-201ENST00000420753 337 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 RPS7P4-201ENST00000444127 582 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 CYCSP44-201ENST00000448560 313 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC104629.2-201ENST00000468627 598 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 SSR3-206ENST00000476217 807 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 MYL6P4-201ENST00000477911 453 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 PPM1AP1-201ENST00000502740 1135 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC105391.1-201ENST00000503155 1045 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC021146.11-201ENST00000503319 491 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 RN7SKP5-201ENST00000517045 272 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AP003084.1-201ENST00000524828 742 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 OR4V1P-201ENST00000525394 1140 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 PDCL3P1-201ENST00000534575 734 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 SLC25A51P2-201ENST00000535708 889 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 BMS1P15-201ENST00000554269 1141 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 NDUFA3P4-201ENST00000560814 250 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC027281.1-201ENST00000574178 758 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 MIR3159-201ENST00000584572 74 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AL512430.4-201ENST00000603085 613 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC113361.1-201ENST00000606683 543 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AL512427.1-201ENST00000618593 349 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC007347.2-201ENST00000623044 180 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC130448.2-201ENST00000624082 374 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AL589993.1-201ENST00000407450 2524 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 AC022819.1-201ENST00000563495 3910 ntBASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
TRIM48Q8IWZ4 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 AL353625.1-202ENST00000366273 571 ntBASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 SNORA70G-201ENST00000383923 142 ntBASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 IGKV1OR2-3-201ENST00000411475 288 ntBASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 GEMIN2P2-201ENST00000418195 715 ntBASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 RPL7P34-201ENST00000433316 712 ntBASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 RPL36AP55-201ENST00000454114 305 ntBASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 AL445669.2-201ENST00000454425 421 ntBASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 NDUFA5P9-201ENST00000472609 340 ntBASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 RPL7AP30-201ENST00000482859 796 ntBASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 AC008967.1-201ENST00000504843 163 ntBASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 SEC11B-201ENST00000518383 499 ntBASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.06□□□□□ -1.28
TRIM48Q8IWZ4 AC010376.1-201ENST00000522101 334 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms