Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 CAV1-204ENST00000393470 598 ntTSL 4 BASIC4.54□□□□□ -1.68
RPL39P62891 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC4.54□□□□□ -1.68
RPL39P62891 U3.43-201ENST00000410734 213 ntBASIC4.54□□□□□ -1.68
RPL39P62891 RPS26P38-201ENST00000414476 348 ntBASIC4.54□□□□□ -1.68
RPL39P62891 NRIR-202ENST00000414795 506 ntTSL 3 BASIC4.54□□□□□ -1.68
RPL39P62891 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC4.54□□□□□ -1.68
RPL39P62891 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC4.54□□□□□ -1.68
RPL39P62891 ANXA2P2-201ENST00000435128 1020 ntBASIC4.54□□□□□ -1.68
RPL39P62891 RPS13P2-201ENST00000437890 455 ntBASIC4.54□□□□□ -1.68
RPL39P62891 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC4.54□□□□□ -1.68
RPL39P62891 AL022237.1-201ENST00000446663 358 ntBASIC4.54□□□□□ -1.68
RPL39P62891 AC005517.1-201ENST00000452091 489 ntBASIC4.54□□□□□ -1.68
RPL39P62891 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC4.54□□□□□ -1.68
RPL39P62891 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC4.54□□□□□ -1.68
RPL39P62891 RN7SL221P-201ENST00000466190 281 ntBASIC4.54□□□□□ -1.68
RPL39P62891 ANK3-213ENST00000486349 493 ntTSL 2 BASIC4.54□□□□□ -1.68
RPL39P62891 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC4.54□□□□□ -1.68
RPL39P62891 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC4.54□□□□□ -1.68
RPL39P62891 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC4.54□□□□□ -1.68
RPL39P62891 AP003080.1-202ENST00000526526 915 ntBASIC4.54□□□□□ -1.68
RPL39P62891 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC4.54□□□□□ -1.68
RPL39P62891 AC084033.2-201ENST00000551532 967 ntBASIC4.54□□□□□ -1.68
RPL39P62891 AL162632.2-201ENST00000553933 399 ntBASIC4.54□□□□□ -1.68
RPL39P62891 AL445383.1-201ENST00000554689 874 ntBASIC4.54□□□□□ -1.68
RPL39P62891 RN7SL664P-201ENST00000584239 305 ntBASIC4.54□□□□□ -1.68
RPL39P62891 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC4.54□□□□□ -1.68
RPL39P62891 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC4.54□□□□□ -1.68
RPL39P62891 AC092960.1-201ENST00000604762 351 ntBASIC4.54□□□□□ -1.68
RPL39P62891 AL138960.1-201ENST00000613838 513 ntBASIC4.54□□□□□ -1.68
RPL39P62891 AC116165.3-201ENST00000614524 400 ntBASIC4.54□□□□□ -1.68
RPL39P62891 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 AC106782.7-201ENST00000624024 418 ntBASIC4.54□□□□□ -1.68
RPL39P62891 AC133555.5-201ENST00000624430 418 ntBASIC4.54□□□□□ -1.68
RPL39P62891 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC4.54□□□□□ -1.68
RPL39P62891 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC4.54□□□□□ -1.68
RPL39P62891 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RPL39P62891 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 ZNF101P1-201ENST00000435701 1720 ntBASIC4.54□□□□□ -1.68
RPL39P62891 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.54□□□□□ -1.68
RPL39P62891 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RPL39P62891 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC4.54□□□□□ -1.68
RPL39P62891 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.54□□□□□ -1.68
RPL39P62891 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RPL39P62891 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.54□□□□□ -1.68
RPL39P62891 AL359955.1-201ENST00000455242 3275 ntBASIC4.54□□□□□ -1.68
RPL39P62891 GLYATL1P1-201ENST00000528297 1607 ntBASIC4.54□□□□□ -1.68
RPL39P62891 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC4.53□□□□□ -1.68
RPL39P62891 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.53□□□□□ -1.68
RPL39P62891 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC4.53□□□□□ -1.68
RPL39P62891 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC4.53□□□□□ -1.68
RPL39P62891 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 AC022164.1-201ENST00000568767 2673 ntBASIC4.53□□□□□ -1.68
RPL39P62891 USP9YP3-201ENST00000434481 1766 ntBASIC4.53□□□□□ -1.68
RPL39P62891 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RPL39P62891 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 RNA5SP114-201ENST00000363780 113 ntBASIC4.53□□□□□ -1.68
RPL39P62891 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC4.53□□□□□ -1.68
RPL39P62891 UBE2V1P14-201ENST00000415815 558 ntBASIC4.53□□□□□ -1.68
RPL39P62891 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC4.53□□□□□ -1.68
RPL39P62891 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
RPL39P62891 CYP4F30P-202ENST00000420048 405 ntBASIC4.53□□□□□ -1.68
RPL39P62891 AC093107.1-201ENST00000422772 609 ntBASIC4.53□□□□□ -1.68
RPL39P62891 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC4.53□□□□□ -1.68
RPL39P62891 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC4.53□□□□□ -1.68
RPL39P62891 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC4.53□□□□□ -1.68
RPL39P62891 DNAJC19P5-201ENST00000443295 316 ntBASIC4.53□□□□□ -1.68
RPL39P62891 AC092967.1-201ENST00000449016 481 ntBASIC4.53□□□□□ -1.68
RPL39P62891 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC4.53□□□□□ -1.68
RPL39P62891 AL022319.1-201ENST00000458183 1167 ntBASIC4.53□□□□□ -1.68
RPL39P62891 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC4.53□□□□□ -1.68
RPL39P62891 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC4.53□□□□□ -1.68
RPL39P62891 AL355032.1-201ENST00000472981 438 ntBASIC4.53□□□□□ -1.68
RPL39P62891 SERPINB5-205ENST00000489441 1268 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RPL39P62891 AOX3P-204ENST00000491025 2107 ntBASIC4.53□□□□□ -1.68
RPL39P62891 AC022206.1-201ENST00000495947 347 ntBASIC4.53□□□□□ -1.68
RPL39P62891 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC4.53□□□□□ -1.68
RPL39P62891 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC4.53□□□□□ -1.68
RPL39P62891 IGHVIII-25-1-201ENST00000522143 241 ntBASIC4.53□□□□□ -1.68
RPL39P62891 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC4.53□□□□□ -1.68
RPL39P62891 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC4.53□□□□□ -1.68
RPL39P62891 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC4.53□□□□□ -1.68
RPL39P62891 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC4.53□□□□□ -1.68
RPL39P62891 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms