Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.6□□□□□ -1.51
AP3S2P59780 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
AP3S2P59780 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
AP3S2P59780 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
AP3S2P59780 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
AP3S2P59780 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
AP3S2P59780 AC102941.1-201ENST00000567616 1537 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 CAP1P2-201ENST00000417455 1409 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
AP3S2P59780 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.59□□□□□ -1.51
AP3S2P59780 AC025470.1-201ENST00000510053 2032 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
AP3S2P59780 AC005725.1-201ENST00000577346 2607 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
AP3S2P59780 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
AP3S2P59780 U3.1-201ENST00000362500 215 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 RNA5SP483-201ENST00000363431 118 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 RNA5SP396-201ENST00000364834 120 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
AP3S2P59780 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC5.59□□□□□ -1.51
AP3S2P59780 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.59□□□□□ -1.51
AP3S2P59780 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.59□□□□□ -1.51
AP3S2P59780 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
AP3S2P59780 RPL7AP72-201ENST00000417266 768 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 GAPDHP69-201ENST00000425504 1008 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC5.59□□□□□ -1.51
AP3S2P59780 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
AP3S2P59780 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.59□□□□□ -1.51
AP3S2P59780 CYP2C56P-201ENST00000440076 291 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC5.59□□□□□ -1.51
AP3S2P59780 AC074121.1-201ENST00000441836 348 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC5.59□□□□□ -1.51
AP3S2P59780 AL445687.2-201ENST00000458156 728 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 RN7SL587P-201ENST00000459853 281 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 AC091982.1-202ENST00000473923 343 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
AP3S2P59780 RNA5SP278-201ENST00000517055 102 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC5.59□□□□□ -1.51
AP3S2P59780 OR4A40P-201ENST00000533878 948 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 RN7SL689P-201ENST00000577215 297 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.59□□□□□ -1.51
AP3S2P59780 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC5.59□□□□□ -1.51
AP3S2P59780 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.59□□□□□ -1.51
AP3S2P59780 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC5.59□□□□□ -1.51
AP3S2P59780 RPS27AP19-201ENST00000597285 458 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC5.59□□□□□ -1.51
AP3S2P59780 RN7SL778P-201ENST00000607160 297 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 MIR6776-201ENST00000616678 59 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
AP3S2P59780 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC5.59□□□□□ -1.51
AP3S2P59780 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.59□□□□□ -1.51
AP3S2P59780 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
AP3S2P59780 AC074141.1-201ENST00000588129 2995 ntBASIC5.59□□□□□ -1.51
AP3S2P59780 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
AP3S2P59780 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
AP3S2P59780 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.59□□□□□ -1.51
AP3S2P59780 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
AP3S2P59780 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
AP3S2P59780 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
AP3S2P59780 AL512329.1-201ENST00000404600 1592 ntBASIC5.59□□□□□ -1.52
AP3S2P59780 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
AP3S2P59780 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
AP3S2P59780 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
AP3S2P59780 AL161912.4-201ENST00000623889 2468 ntBASIC5.58□□□□□ -1.52
AP3S2P59780 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
AP3S2P59780 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
AP3S2P59780 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
AP3S2P59780 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.58□□□□□ -1.52
AP3S2P59780 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
AP3S2P59780 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.58□□□□□ -1.52
AP3S2P59780 AC011455.2-201ENST00000599320 3336 ntBASIC5.58□□□□□ -1.52
AP3S2P59780 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
AP3S2P59780 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
AP3S2P59780 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
AP3S2P59780 NEK2P2-201ENST00000438441 1338 ntBASIC5.58□□□□□ -1.52
AP3S2P59780 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
AP3S2P59780 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
AP3S2P59780 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
AP3S2P59780 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
AP3S2P59780 RN7SKP55-201ENST00000364888 307 ntBASIC5.58□□□□□ -1.52
AP3S2P59780 RNA5SP297-201ENST00000391029 113 ntBASIC5.58□□□□□ -1.52
AP3S2P59780 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC5.58□□□□□ -1.52
AP3S2P59780 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.58□□□□□ -1.52
AP3S2P59780 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC5.58□□□□□ -1.52
AP3S2P59780 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC5.58□□□□□ -1.52
AP3S2P59780 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
AP3S2P59780 AC117382.1-201ENST00000468074 730 ntBASIC5.58□□□□□ -1.52
AP3S2P59780 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
AP3S2P59780 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.58□□□□□ -1.52
AP3S2P59780 AC093815.1-201ENST00000508637 280 ntBASIC5.58□□□□□ -1.52
AP3S2P59780 AC114801.1-201ENST00000512633 297 ntBASIC5.58□□□□□ -1.52
AP3S2P59780 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.58□□□□□ -1.52
AP3S2P59780 NPM1P21-201ENST00000513394 762 ntBASIC5.58□□□□□ -1.52
AP3S2P59780 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.58□□□□□ -1.52
AP3S2P59780 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
AP3S2P59780 TBX5-AS1-203ENST00000531202 822 ntTSL 2 BASIC5.58□□□□□ -1.52
AP3S2P59780 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
AP3S2P59780 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
AP3S2P59780 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC5.58□□□□□ -1.52
AP3S2P59780 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms