Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.93□□□□□ -1.3
MMP13P45452 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
MMP13P45452 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.93□□□□□ -1.3
MMP13P45452 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
MMP13P45452 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.93□□□□□ -1.3
MMP13P45452 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 SNORA70H-201ENST00000383910 135 ntBASIC6.93□□□□□ -1.3
MMP13P45452 SNORA70J-201ENST00000384182 135 ntBASIC6.93□□□□□ -1.3
MMP13P45452 AP003170.5-201ENST00000397185 335 ntBASIC6.93□□□□□ -1.3
MMP13P45452 AL136100.1-201ENST00000407696 330 ntBASIC6.93□□□□□ -1.3
MMP13P45452 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.93□□□□□ -1.3
MMP13P45452 RNA5SP251-201ENST00000410614 137 ntBASIC6.93□□□□□ -1.3
MMP13P45452 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.93□□□□□ -1.3
MMP13P45452 GAPDHP57-201ENST00000424400 585 ntBASIC6.93□□□□□ -1.3
MMP13P45452 AL512637.1-201ENST00000439523 1231 ntBASIC6.93□□□□□ -1.3
MMP13P45452 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.93□□□□□ -1.3
MMP13P45452 ZNF736P1Y-201ENST00000440402 1276 ntBASIC6.93□□□□□ -1.3
MMP13P45452 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
MMP13P45452 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.93□□□□□ -1.3
MMP13P45452 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.93□□□□□ -1.3
MMP13P45452 AL139156.3-201ENST00000454802 394 ntBASIC6.93□□□□□ -1.3
MMP13P45452 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.93□□□□□ -1.3
MMP13P45452 SULT1D1P-201ENST00000458020 882 ntBASIC6.93□□□□□ -1.3
MMP13P45452 RPL23AP80-201ENST00000495605 424 ntBASIC6.93□□□□□ -1.3
MMP13P45452 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.93□□□□□ -1.3
MMP13P45452 AC021146.11-201ENST00000503319 491 ntBASIC6.93□□□□□ -1.3
MMP13P45452 AC008868.1-201ENST00000509786 737 ntBASIC6.93□□□□□ -1.3
MMP13P45452 SNORA48.9-201ENST00000516419 162 ntBASIC6.93□□□□□ -1.3
MMP13P45452 IGKV2D-38-201ENST00000518423 240 ntBASIC6.93□□□□□ -1.3
MMP13P45452 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.93□□□□□ -1.3
MMP13P45452 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
MMP13P45452 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.93□□□□□ -1.3
MMP13P45452 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.93□□□□□ -1.3
MMP13P45452 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.93□□□□□ -1.3
MMP13P45452 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.93□□□□□ -1.3
MMP13P45452 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
MMP13P45452 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 OR7E19P-202ENST00000589942 844 ntBASIC6.93□□□□□ -1.3
MMP13P45452 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.93□□□□□ -1.3
MMP13P45452 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.93□□□□□ -1.3
MMP13P45452 AL953862.2-201ENST00000603089 820 ntBASIC6.93□□□□□ -1.3
MMP13P45452 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
MMP13P45452 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
MMP13P45452 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
MMP13P45452 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
MMP13P45452 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
MMP13P45452 Z97989.1-201ENST00000531702 2421 ntBASIC6.92□□□□□ -1.3
MMP13P45452 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
MMP13P45452 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
MMP13P45452 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
MMP13P45452 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
MMP13P45452 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
MMP13P45452 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
MMP13P45452 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
MMP13P45452 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
MMP13P45452 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
MMP13P45452 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.92□□□□□ -1.3
MMP13P45452 RNA5SP152-201ENST00000365184 110 ntBASIC6.92□□□□□ -1.3
MMP13P45452 RNA5SP355-201ENST00000365317 135 ntBASIC6.92□□□□□ -1.3
MMP13P45452 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
MMP13P45452 ZNF37CP-201ENST00000406795 241 ntBASIC6.92□□□□□ -1.3
MMP13P45452 SETP22-201ENST00000412243 957 ntBASIC6.92□□□□□ -1.3
MMP13P45452 SMC4P1-201ENST00000414479 527 ntBASIC6.92□□□□□ -1.3
MMP13P45452 RPL18AP14-201ENST00000417685 526 ntBASIC6.92□□□□□ -1.3
MMP13P45452 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.92□□□□□ -1.3
MMP13P45452 AC013410.2-201ENST00000422627 201 ntBASIC6.92□□□□□ -1.3
MMP13P45452 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
MMP13P45452 AC009303.1-201ENST00000426307 352 ntBASIC6.92□□□□□ -1.3
MMP13P45452 PAICSP2-201ENST00000429118 1150 ntBASIC6.92□□□□□ -1.3
MMP13P45452 AL590128.1-201ENST00000433407 286 ntBASIC6.92□□□□□ -1.3
MMP13P45452 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.92□□□□□ -1.3
MMP13P45452 RPL23AP28-201ENST00000448062 470 ntBASIC6.92□□□□□ -1.3
MMP13P45452 AC009244.1-201ENST00000450566 258 ntBASIC6.92□□□□□ -1.3
MMP13P45452 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
MMP13P45452 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.92□□□□□ -1.3
MMP13P45452 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.92□□□□□ -1.3
MMP13P45452 RNA5SP318-201ENST00000516352 92 ntBASIC6.92□□□□□ -1.3
MMP13P45452 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.92□□□□□ -1.3
MMP13P45452 AP005902.2-201ENST00000518393 307 ntBASIC6.92□□□□□ -1.3
MMP13P45452 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.92□□□□□ -1.3
MMP13P45452 AC140063.1-201ENST00000541343 259 ntBASIC6.92□□□□□ -1.3
MMP13P45452 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
MMP13P45452 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.92□□□□□ -1.3
MMP13P45452 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.92□□□□□ -1.3
MMP13P45452 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.92□□□□□ -1.3
MMP13P45452 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms