Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC8.49□□□□□ -1.05
ERCC3P19447 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC8.49□□□□□ -1.05
ERCC3P19447 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC8.49□□□□□ -1.05
ERCC3P19447 AC005040.1-201ENST00000437783 482 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC8.49□□□□□ -1.05
ERCC3P19447 FUNDC2P2-202ENST00000443452 493 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 AC099063.2-201ENST00000446360 662 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC8.49□□□□□ -1.05
ERCC3P19447 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC8.49□□□□□ -1.05
ERCC3P19447 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC8.49□□□□□ -1.05
ERCC3P19447 AL390026.1-201ENST00000456647 457 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 RARRES2P3-201ENST00000457739 473 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 AC013787.1-201ENST00000460165 307 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 BOLA3P3-201ENST00000505182 232 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC8.49□□□□□ -1.05
ERCC3P19447 AC008868.1-201ENST00000509786 737 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
ERCC3P19447 SCARNA11.1-201ENST00000516918 132 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 MIR4800-201ENST00000537353 80 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC8.49□□□□□ -1.05
ERCC3P19447 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC8.49□□□□□ -1.05
ERCC3P19447 AL132857.1-201ENST00000555180 708 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC8.49□□□□□ -1.05
ERCC3P19447 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC8.49□□□□□ -1.05
ERCC3P19447 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC8.49□□□□□ -1.05
ERCC3P19447 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC8.49□□□□□ -1.05
ERCC3P19447 AP001160.4-201ENST00000596971 382 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC8.49□□□□□ -1.05
ERCC3P19447 SNX6P1-201ENST00000601728 1224 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 AC234772.3-201ENST00000602277 528 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 AC068802.1-201ENST00000603420 732 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 AC092960.1-201ENST00000604762 351 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 AC245100.7-201ENST00000609678 442 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 AP000676.4-201ENST00000624659 623 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
ERCC3P19447 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC8.49□□□□□ -1.05
ERCC3P19447 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
ERCC3P19447 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
ERCC3P19447 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
ERCC3P19447 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.05
ERCC3P19447 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
ERCC3P19447 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8.49□□□□□ -1.05
ERCC3P19447 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
ERCC3P19447 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC8.49□□□□□ -1.05
ERCC3P19447 AC090774.4-201ENST00000578888 1372 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
ERCC3P19447 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
ERCC3P19447 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
ERCC3P19447 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
ERCC3P19447 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.48□□□□□ -1.05
ERCC3P19447 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC8.48□□□□□ -1.05
ERCC3P19447 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
ERCC3P19447 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.48□□□□□ -1.05
ERCC3P19447 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
ERCC3P19447 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC8.48□□□□□ -1.05
ERCC3P19447 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC8.48□□□□□ -1.05
ERCC3P19447 AC069222.1-201ENST00000608028 3360 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
ERCC3P19447 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC8.48□□□□□ -1.05
ERCC3P19447 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
ERCC3P19447 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
ERCC3P19447 RNU5B-4P-201ENST00000363508 111 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC8.48□□□□□ -1.05
ERCC3P19447 TAS2R15P-201ENST00000390674 928 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 AL157698.1-201ENST00000415190 1011 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC8.48□□□□□ -1.05
ERCC3P19447 AL035246.1-201ENST00000433554 1255 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 AC013403.1-201ENST00000436954 263 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 RPL5P27-201ENST00000437011 881 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC8.48□□□□□ -1.05
ERCC3P19447 MTATP6P26-201ENST00000445926 662 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
ERCC3P19447 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC8.48□□□□□ -1.05
ERCC3P19447 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC8.48□□□□□ -1.05
ERCC3P19447 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC8.48□□□□□ -1.05
ERCC3P19447 AC096661.1-201ENST00000515870 822 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 OR7E161P-201ENST00000533722 967 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC8.48□□□□□ -1.05
ERCC3P19447 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC8.48□□□□□ -1.05
ERCC3P19447 AC124283.4-201ENST00000581815 456 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC8.48□□□□□ -1.05
ERCC3P19447 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC8.48□□□□□ -1.05
ERCC3P19447 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC8.48□□□□□ -1.05
ERCC3P19447 AC005479.3-201ENST00000602790 431 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 AC084373.1-201ENST00000603311 235 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 ELOCP35-201ENST00000604289 336 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 AC067838.1-201ENST00000606064 577 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC8.48□□□□□ -1.05
ERCC3P19447 U91328.4-201ENST00000608919 517 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
ERCC3P19447 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 MIR6813-201ENST00000621638 56 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC8.48□□□□□ -1.05
ERCC3P19447 AC083865.1-201ENST00000636634 831 ntBASIC8.48□□□□□ -1.05
ERCC3P19447 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
ERCC3P19447 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
ERCC3P19447 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC8.48□□□□□ -1.05
ERCC3P19447 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
ERCC3P19447 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms