Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL354983.1-201ENST00000434580 906 ntBASIC8.3□□□□□ -1.08
LIG1P18858 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC8.3□□□□□ -1.08
LIG1P18858 AL591379.2-201ENST00000450223 397 ntBASIC8.3□□□□□ -1.08
LIG1P18858 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LIG1P18858 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC8.3□□□□□ -1.08
LIG1P18858 RPL23P10-201ENST00000468780 412 ntBASIC8.3□□□□□ -1.08
LIG1P18858 RPS10P20-201ENST00000494130 463 ntBASIC8.3□□□□□ -1.08
LIG1P18858 RN7SL182P-201ENST00000496499 300 ntBASIC8.3□□□□□ -1.08
LIG1P18858 ENPP7P3-201ENST00000509123 241 ntBASIC8.3□□□□□ -1.08
LIG1P18858 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC8.3□□□□□ -1.08
LIG1P18858 RPL10P18-201ENST00000519384 309 ntBASIC8.3□□□□□ -1.08
LIG1P18858 HAUS1P3-201ENST00000523909 662 ntBASIC8.3□□□□□ -1.08
LIG1P18858 OR5D2P-201ENST00000524390 911 ntBASIC8.3□□□□□ -1.08
LIG1P18858 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC8.3□□□□□ -1.08
LIG1P18858 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC8.3□□□□□ -1.08
LIG1P18858 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LIG1P18858 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC8.3□□□□□ -1.08
LIG1P18858 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC8.3□□□□□ -1.08
LIG1P18858 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
LIG1P18858 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC8.3□□□□□ -1.08
LIG1P18858 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC8.3□□□□□ -1.08
LIG1P18858 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LIG1P18858 MTND3P13-201ENST00000574391 343 ntBASIC8.3□□□□□ -1.08
LIG1P18858 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC8.3□□□□□ -1.08
LIG1P18858 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC8.3□□□□□ -1.08
LIG1P18858 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC8.3□□□□□ -1.08
LIG1P18858 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.3□□□□□ -1.08
LIG1P18858 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC8.3□□□□□ -1.08
LIG1P18858 AC108451.2-201ENST00000603875 538 ntBASIC8.3□□□□□ -1.08
LIG1P18858 MIR6731-201ENST00000614863 72 ntBASIC8.3□□□□□ -1.08
LIG1P18858 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC8.3□□□□□ -1.08
LIG1P18858 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC8.3□□□□□ -1.08
LIG1P18858 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LIG1P18858 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC8.3□□□□□ -1.08
LIG1P18858 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LIG1P18858 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
LIG1P18858 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LIG1P18858 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.3□□□□□ -1.08
LIG1P18858 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LIG1P18858 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
LIG1P18858 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LIG1P18858 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LIG1P18858 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC8.3□□□□□ -1.08
LIG1P18858 GOT2P1-201ENST00000440922 1309 ntBASIC8.29□□□□□ -1.08
LIG1P18858 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.29□□□□□ -1.08
LIG1P18858 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LIG1P18858 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LIG1P18858 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC8.29□□□□□ -1.08
LIG1P18858 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LIG1P18858 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC8.29□□□□□ -1.08
LIG1P18858 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC8.29□□□□□ -1.08
LIG1P18858 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
LIG1P18858 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
LIG1P18858 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LIG1P18858 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
LIG1P18858 RN7SKP211-201ENST00000363328 315 ntBASIC8.29□□□□□ -1.08
LIG1P18858 SNORD51.1-201ENST00000365405 77 ntBASIC8.29□□□□□ -1.08
LIG1P18858 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC8.29□□□□□ -1.08
LIG1P18858 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
LIG1P18858 SNORD116-8-201ENST00000384365 95 ntBASIC8.29□□□□□ -1.08
LIG1P18858 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LIG1P18858 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
LIG1P18858 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC8.29□□□□□ -1.08
LIG1P18858 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC8.29□□□□□ -1.08
LIG1P18858 TAS2R2P-201ENST00000421146 910 ntBASIC8.29□□□□□ -1.08
LIG1P18858 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC8.29□□□□□ -1.08
LIG1P18858 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
LIG1P18858 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC8.29□□□□□ -1.08
LIG1P18858 AC245047.1-201ENST00000433276 873 ntBASIC8.29□□□□□ -1.08
LIG1P18858 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
LIG1P18858 NQO1-204ENST00000439109 924 ntTSL 2 BASIC8.29□□□□□ -1.08
LIG1P18858 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC8.29□□□□□ -1.08
LIG1P18858 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC8.29□□□□□ -1.08
LIG1P18858 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC8.29□□□□□ -1.08
LIG1P18858 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
LIG1P18858 AC010486.3-201ENST00000511602 785 ntBASIC8.29□□□□□ -1.08
LIG1P18858 SNORA76.2-201ENST00000517095 137 ntBASIC8.29□□□□□ -1.08
LIG1P18858 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
LIG1P18858 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC8.29□□□□□ -1.08
LIG1P18858 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC8.29□□□□□ -1.08
LIG1P18858 OR6M3P-201ENST00000531567 700 ntBASIC8.29□□□□□ -1.08
LIG1P18858 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
LIG1P18858 AC074029.2-201ENST00000551045 634 ntBASIC8.29□□□□□ -1.08
LIG1P18858 AL049869.4-201ENST00000555669 178 ntBASIC8.29□□□□□ -1.08
LIG1P18858 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC8.29□□□□□ -1.08
LIG1P18858 AC011270.1-201ENST00000558606 583 ntBASIC8.29□□□□□ -1.08
LIG1P18858 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC8.29□□□□□ -1.08
LIG1P18858 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC8.29□□□□□ -1.08
LIG1P18858 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC8.29□□□□□ -1.08
LIG1P18858 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC8.29□□□□□ -1.08
LIG1P18858 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC8.29□□□□□ -1.08
LIG1P18858 AC015801.1-201ENST00000585651 153 ntBASIC8.29□□□□□ -1.08
LIG1P18858 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC8.29□□□□□ -1.08
LIG1P18858 AL390058.1-201ENST00000603834 629 ntBASIC8.29□□□□□ -1.08
LIG1P18858 AL358072.1-201ENST00000604156 575 ntBASIC8.29□□□□□ -1.08
LIG1P18858 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC8.29□□□□□ -1.08
LIG1P18858 AC011330.2-201ENST00000621680 635 ntBASIC8.29□□□□□ -1.08
LIG1P18858 AC087893.2-201ENST00000623272 255 ntBASIC8.29□□□□□ -1.08
LIG1P18858 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC8.29□□□□□ -1.08
LIG1P18858 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms