Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AL354714.5-201ENST00000450131 590 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 RN7SL165P-201ENST00000477476 291 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 RPL34P29-201ENST00000491411 325 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 RN7SL608P-201ENST00000492377 279 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AC016559.1-201ENST00000511420 199 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AC017007.1-201ENST00000511960 415 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 IGLC4-201ENST00000517690 248 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AC011447.2-201ENST00000592921 283 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AL136139.1-201ENST00000605568 222 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AC113361.1-201ENST00000606683 543 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 PART1_3.1-201ENST00000619680 131 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AC087894.3-201ENST00000623682 349 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 AC018628.1-201ENST00000624147 3819 ntBASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC71LQ8N9Z2 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AC011369.2-201ENST00000624423 1567 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AC020656.2-201ENST00000613291 5309 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 HSPD1P8-201ENST00000400121 1658 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 SNORA70.3-201ENST00000365075 132 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 RNA5SP53-201ENST00000391299 120 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AL360271.1-201ENST00000395679 510 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AL034372.1-201ENST00000407586 754 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 RN7SKP296-201ENST00000411185 341 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 RPS7P12-201ENST00000422385 582 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 REG1CP-206ENST00000447469 496 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 HIST1H2APS6-201ENST00000448609 364 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 OR7E102P-201ENST00000448855 1015 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 RN7SL228P-201ENST00000470060 303 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 RPL23AP68-201ENST00000480924 445 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 TAAR3P-202ENST00000481759 1025 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 RPS26P24-201ENST00000497656 331 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AC021146.11-201ENST00000503319 491 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 SNX18P23-201ENST00000510867 677 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AC026774.2-201ENST00000513990 1098 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AC084337.1-201ENST00000524809 686 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AP001803.1-201ENST00000525668 147 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AP000619.2-201ENST00000546014 969 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 EIF4A3P1-201ENST00000578499 647 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AP001120.4-201ENST00000590231 108 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 RN7SL820P-201ENST00000616437 299 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 AC105235.1-201ENST00000623208 1816 ntBASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC71LQ8N9Z2 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms