Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.35□□□□□ -1.23
TPM4P67936 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC7.35□□□□□ -1.23
TPM4P67936 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
TPM4P67936 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TPM4P67936 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.35□□□□□ -1.23
TPM4P67936 AL161901.1-201ENST00000624954 3425 ntBASIC7.35□□□□□ -1.23
TPM4P67936 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.35□□□□□ -1.23
TPM4P67936 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
TPM4P67936 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
TPM4P67936 AC009135.2-201ENST00000624136 1768 ntBASIC7.35□□□□□ -1.23
TPM4P67936 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.35□□□□□ -1.23
TPM4P67936 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TPM4P67936 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TPM4P67936 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
TPM4P67936 HSPD1P8-201ENST00000400121 1658 ntBASIC7.35□□□□□ -1.23
TPM4P67936 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.34□□□□□ -1.23
TPM4P67936 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
TPM4P67936 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.34□□□□□ -1.23
TPM4P67936 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.34□□□□□ -1.23
TPM4P67936 ZNF806-201ENST00000438300 1774 ntBASIC7.34□□□□□ -1.23
TPM4P67936 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
TPM4P67936 AP002512.4-202ENST00000641599 4530 ntBASIC7.34□□□□□ -1.23
TPM4P67936 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TPM4P67936 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TPM4P67936 RNA5SP114-201ENST00000363780 113 ntBASIC7.34□□□□□ -1.23
TPM4P67936 MIR128-2-201ENST00000384893 84 ntBASIC7.34□□□□□ -1.23
TPM4P67936 RNA5SP115-201ENST00000411160 107 ntBASIC7.34□□□□□ -1.23
TPM4P67936 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC7.34□□□□□ -1.23
TPM4P67936 AC009518.3-201ENST00000438972 253 ntBASIC7.34□□□□□ -1.23
TPM4P67936 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.34□□□□□ -1.23
TPM4P67936 RPL23AP28-201ENST00000448062 470 ntBASIC7.34□□□□□ -1.23
TPM4P67936 AL096803.1-201ENST00000456921 1021 ntBASIC7.34□□□□□ -1.23
TPM4P67936 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TPM4P67936 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.34□□□□□ -1.23
TPM4P67936 RNA5SP318-201ENST00000516352 92 ntBASIC7.34□□□□□ -1.23
TPM4P67936 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.34□□□□□ -1.23
TPM4P67936 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.34□□□□□ -1.23
TPM4P67936 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC7.34□□□□□ -1.23
TPM4P67936 NDUFA3P1-201ENST00000588007 252 ntBASIC7.34□□□□□ -1.23
TPM4P67936 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC7.34□□□□□ -1.23
TPM4P67936 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.34□□□□□ -1.23
TPM4P67936 AL049840.5-201ENST00000602827 552 ntBASIC7.34□□□□□ -1.23
TPM4P67936 AC009237.12-201ENST00000604755 742 ntBASIC7.34□□□□□ -1.23
TPM4P67936 AL590032.1-201ENST00000604920 252 ntBASIC7.34□□□□□ -1.23
TPM4P67936 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TPM4P67936 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
TPM4P67936 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.34□□□□□ -1.23
TPM4P67936 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC7.34□□□□□ -1.23
TPM4P67936 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.34□□□□□ -1.23
TPM4P67936 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TPM4P67936 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC7.34□□□□□ -1.23
TPM4P67936 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TPM4P67936 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.34□□□□□ -1.23
TPM4P67936 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
TPM4P67936 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC7.34□□□□□ -1.24
TPM4P67936 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TPM4P67936 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
TPM4P67936 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TPM4P67936 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TPM4P67936 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.33□□□□□ -1.24
TPM4P67936 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TPM4P67936 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.33□□□□□ -1.24
TPM4P67936 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TPM4P67936 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TPM4P67936 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TPM4P67936 AL157831.2-201ENST00000564681 3095 ntBASIC7.33□□□□□ -1.24
TPM4P67936 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.33□□□□□ -1.24
TPM4P67936 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.33□□□□□ -1.24
TPM4P67936 AC023886.2-201ENST00000321285 411 ntBASIC7.33□□□□□ -1.24
TPM4P67936 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
TPM4P67936 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.33□□□□□ -1.24
TPM4P67936 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.33□□□□□ -1.24
TPM4P67936 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.33□□□□□ -1.24
TPM4P67936 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
TPM4P67936 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.33□□□□□ -1.24
TPM4P67936 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.33□□□□□ -1.24
TPM4P67936 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC7.33□□□□□ -1.24
TPM4P67936 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.33□□□□□ -1.24
TPM4P67936 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.33□□□□□ -1.24
TPM4P67936 SNORA35.1-201ENST00000458908 128 ntBASIC7.33□□□□□ -1.24
TPM4P67936 PPP1R2P6-201ENST00000478565 588 ntBASIC7.33□□□□□ -1.24
TPM4P67936 RPL7AP23-201ENST00000482625 776 ntBASIC7.33□□□□□ -1.24
TPM4P67936 ANK3-213ENST00000486349 493 ntTSL 2 BASIC7.33□□□□□ -1.24
TPM4P67936 GAPDHP38-201ENST00000503632 1002 ntBASIC7.33□□□□□ -1.24
TPM4P67936 MTCYBP44-201ENST00000514835 823 ntBASIC7.33□□□□□ -1.24
TPM4P67936 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.33□□□□□ -1.24
TPM4P67936 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.33□□□□□ -1.24
TPM4P67936 AC073916.1-201ENST00000545095 130 ntBASIC7.33□□□□□ -1.24
TPM4P67936 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
TPM4P67936 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
TPM4P67936 AC091304.4-201ENST00000565703 620 ntBASIC7.33□□□□□ -1.24
TPM4P67936 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC7.33□□□□□ -1.24
TPM4P67936 AP003115.1-201ENST00000569849 463 ntBASIC7.33□□□□□ -1.24
TPM4P67936 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC7.33□□□□□ -1.24
TPM4P67936 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC7.33□□□□□ -1.24
TPM4P67936 AC024589.2-201ENST00000605642 1294 ntBASIC7.33□□□□□ -1.24
TPM4P67936 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.33□□□□□ -1.24
TPM4P67936 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
TPM4P67936 AC005277.2-201ENST00000617898 390 ntBASIC7.33□□□□□ -1.24
TPM4P67936 AC010320.5-201ENST00000619124 676 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms