Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CDC42P2-201ENST00000448566 569 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 AL591438.2-201ENST00000452635 691 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CKS1BP61024 RPS18P13-201ENST00000461260 454 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 AC135721.2-201ENST00000464237 300 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC4.71□□□□□ -1.66
CKS1BP61024 RPS7P11-201ENST00000484240 586 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
CKS1BP61024 CREM-242ENST00000490511 469 ntTSL 2 BASIC4.71□□□□□ -1.66
CKS1BP61024 IGLV1-62-201ENST00000518003 441 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC4.71□□□□□ -1.66
CKS1BP61024 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC4.71□□□□□ -1.66
CKS1BP61024 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC4.71□□□□□ -1.66
CKS1BP61024 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CKS1BP61024 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC4.71□□□□□ -1.66
CKS1BP61024 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
CKS1BP61024 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC4.71□□□□□ -1.66
CKS1BP61024 AC243312.1-201ENST00000570582 275 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC4.71□□□□□ -1.66
CKS1BP61024 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC4.71□□□□□ -1.66
CKS1BP61024 RN7SL667P-201ENST00000582817 298 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 GTF2IP6-201ENST00000583143 541 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 WBP1LP11-201ENST00000586141 328 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CKS1BP61024 AC024884.1-201ENST00000620583 399 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 AC034229.6-201ENST00000623704 224 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 AC004943.1-203ENST00000624370 1074 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
CKS1BP61024 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CKS1BP61024 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CKS1BP61024 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CKS1BP61024 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.71□□□□□ -1.66
CKS1BP61024 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
CKS1BP61024 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CKS1BP61024 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CKS1BP61024 AC022325.1-201ENST00000502748 2199 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CKS1BP61024 AL358913.2-201ENST00000553881 1548 ntBASIC4.71□□□□□ -1.66
CKS1BP61024 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CKS1BP61024 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CKS1BP61024 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CKS1BP61024 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 DCN-218ENST00000551354 2924 ntTSL 3 BASIC4.7□□□□□ -1.66
CKS1BP61024 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 TPTE2P2-201ENST00000403471 1466 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 MTCO1P46-201ENST00000451639 1491 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.7□□□□□ -1.66
CKS1BP61024 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC4.7□□□□□ -1.66
CKS1BP61024 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC4.7□□□□□ -1.66
CKS1BP61024 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 AC113608.1-201ENST00000398740 305 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 NPM1P30-201ENST00000425092 828 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 AC130472.1-201ENST00000427885 309 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CKS1BP61024 AL606752.1-201ENST00000435442 666 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CKS1BP61024 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC4.7□□□□□ -1.66
CKS1BP61024 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.7□□□□□ -1.66
CKS1BP61024 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC4.7□□□□□ -1.66
CKS1BP61024 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC4.7□□□□□ -1.66
CKS1BP61024 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC4.7□□□□□ -1.66
CKS1BP61024 RN7SL549P-201ENST00000478997 282 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC4.7□□□□□ -1.66
CKS1BP61024 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC4.7□□□□□ -1.66
CKS1BP61024 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 AC114801.1-201ENST00000512633 297 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 EEF1B2P2-201ENST00000519625 676 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC4.7□□□□□ -1.66
CKS1BP61024 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC4.7□□□□□ -1.66
CKS1BP61024 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CKS1BP61024 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC4.7□□□□□ -1.66
CKS1BP61024 AC016144.1-201ENST00000548175 1087 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CKS1BP61024 AC044860.3-201ENST00000559957 368 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC4.7□□□□□ -1.66
CKS1BP61024 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC4.7□□□□□ -1.66
CKS1BP61024 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC4.7□□□□□ -1.66
CKS1BP61024 EIF1-207ENST00000591776 797 ntTSL 4 BASIC4.7□□□□□ -1.66
CKS1BP61024 AL445647.2-201ENST00000615170 130 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 Six3os1_4.1-201ENST00000615706 324 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 AL132821.1-201ENST00000616029 394 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 BX005195.1-201ENST00000618097 1198 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC4.7□□□□□ -1.66
CKS1BP61024 AP005139.1-201ENST00000580702 1647 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 AC105114.1-201ENST00000624795 1862 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 LYARP1-201ENST00000436977 1501 ntBASIC4.7□□□□□ -1.66
CKS1BP61024 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.7□□□□□ -1.66
CKS1BP61024 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CKS1BP61024 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms