Protein–RNA interactions for Protein: P35548

MSX2, Homeobox protein MSX-2, humanhuman

Predicted RBP Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2P35548 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.7□□□□□ -1.34
MSX2P35548 RNU6-1102P-201ENST00000516149 96 ntBASIC6.7□□□□□ -1.34
MSX2P35548 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.7□□□□□ -1.34
MSX2P35548 C1DP5-201ENST00000525775 383 ntBASIC6.7□□□□□ -1.34
MSX2P35548 NPM1P35-201ENST00000533043 868 ntBASIC6.7□□□□□ -1.34
MSX2P35548 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.7□□□□□ -1.34
MSX2P35548 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
MSX2P35548 AC025252.2-201ENST00000537470 502 ntBASIC6.7□□□□□ -1.34
MSX2P35548 AC087894.1-201ENST00000538359 518 ntBASIC6.7□□□□□ -1.34
MSX2P35548 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.7□□□□□ -1.34
MSX2P35548 AC027667.1-201ENST00000545814 304 ntBASIC6.7□□□□□ -1.34
MSX2P35548 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC6.7□□□□□ -1.34
MSX2P35548 AC144548.1-201ENST00000549577 324 ntBASIC6.7□□□□□ -1.34
MSX2P35548 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC6.7□□□□□ -1.34
MSX2P35548 SRMP2-201ENST00000553832 916 ntBASIC6.7□□□□□ -1.34
MSX2P35548 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC6.7□□□□□ -1.34
MSX2P35548 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.7□□□□□ -1.34
MSX2P35548 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
MSX2P35548 AC243312.1-201ENST00000570582 275 ntBASIC6.7□□□□□ -1.34
MSX2P35548 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC6.7□□□□□ -1.34
MSX2P35548 AC087575.1-201ENST00000585087 229 ntBASIC6.7□□□□□ -1.34
MSX2P35548 AC005495.1-201ENST00000586611 1211 ntBASIC6.7□□□□□ -1.34
MSX2P35548 MTCO2P2-201ENST00000591258 225 ntBASIC6.7□□□□□ -1.34
MSX2P35548 AC110760.3-201ENST00000598794 467 ntBASIC6.7□□□□□ -1.34
MSX2P35548 AL450270.1-201ENST00000606160 391 ntBASIC6.7□□□□□ -1.34
MSX2P35548 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.7□□□□□ -1.34
MSX2P35548 FAM74A6-203ENST00000615956 481 ntBASIC6.7□□□□□ -1.34
MSX2P35548 AC127071.1-201ENST00000624997 712 ntBASIC6.7□□□□□ -1.34
MSX2P35548 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.7□□□□□ -1.34
MSX2P35548 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.7□□□□□ -1.34
MSX2P35548 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
MSX2P35548 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
MSX2P35548 MFSD8-213ENST00000641134 1327 ntBASIC6.7□□□□□ -1.34
MSX2P35548 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.7□□□□□ -1.34
MSX2P35548 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.7□□□□□ -1.34
MSX2P35548 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.7□□□□□ -1.34
MSX2P35548 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
MSX2P35548 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
MSX2P35548 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
MSX2P35548 AC007114.2-201ENST00000576014 4281 ntBASIC6.7□□□□□ -1.34
MSX2P35548 AC074198.1-201ENST00000506546 1397 ntBASIC6.69□□□□□ -1.34
MSX2P35548 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MSX2P35548 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
MSX2P35548 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MSX2P35548 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
MSX2P35548 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
MSX2P35548 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MSX2P35548 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
MSX2P35548 TRIM60P14-201ENST00000513444 1419 ntBASIC6.69□□□□□ -1.34
MSX2P35548 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
MSX2P35548 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
MSX2P35548 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MSX2P35548 OR7A2P-201ENST00000304105 930 ntBASIC6.69□□□□□ -1.34
MSX2P35548 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MSX2P35548 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MSX2P35548 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
MSX2P35548 RNU6-152P-201ENST00000384037 107 ntBASIC6.69□□□□□ -1.34
MSX2P35548 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
MSX2P35548 HNRNPDP2-201ENST00000406475 478 ntBASIC6.69□□□□□ -1.34
MSX2P35548 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.69□□□□□ -1.34
MSX2P35548 AL024507.1-201ENST00000412741 274 ntBASIC6.69□□□□□ -1.34
MSX2P35548 CTSLP8-201ENST00000413075 967 ntBASIC6.69□□□□□ -1.34
MSX2P35548 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC6.69□□□□□ -1.34
MSX2P35548 XKRYP1-201ENST00000423438 492 ntBASIC6.69□□□□□ -1.34
MSX2P35548 AC092066.1-201ENST00000425131 317 ntBASIC6.69□□□□□ -1.34
MSX2P35548 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.69□□□□□ -1.34
MSX2P35548 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.69□□□□□ -1.34
MSX2P35548 XKRYP2-201ENST00000432915 492 ntBASIC6.69□□□□□ -1.34
MSX2P35548 USP9YP28-201ENST00000435142 589 ntBASIC6.69□□□□□ -1.34
MSX2P35548 VN1R110P-201ENST00000438988 971 ntBASIC6.69□□□□□ -1.34
MSX2P35548 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MSX2P35548 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.69□□□□□ -1.34
MSX2P35548 AL135929.1-201ENST00000449287 552 ntBASIC6.69□□□□□ -1.34
MSX2P35548 AL590648.1-201ENST00000456479 460 ntBASIC6.69□□□□□ -1.34
MSX2P35548 RN7SL587P-201ENST00000459853 281 ntBASIC6.69□□□□□ -1.34
MSX2P35548 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.69□□□□□ -1.34
MSX2P35548 RN7SL621P-201ENST00000472565 299 ntBASIC6.69□□□□□ -1.34
MSX2P35548 RN7SL368P-201ENST00000473384 277 ntBASIC6.69□□□□□ -1.34
MSX2P35548 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MSX2P35548 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC6.69□□□□□ -1.34
MSX2P35548 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.69□□□□□ -1.34
MSX2P35548 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.69□□□□□ -1.34
MSX2P35548 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.69□□□□□ -1.34
MSX2P35548 MTCO1P47-201ENST00000523889 1271 ntBASIC6.69□□□□□ -1.34
MSX2P35548 AP003385.2-201ENST00000524910 973 ntBASIC6.69□□□□□ -1.34
MSX2P35548 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC6.69□□□□□ -1.34
MSX2P35548 AP006587.2-201ENST00000530696 493 ntBASIC6.69□□□□□ -1.34
MSX2P35548 AP000662.1-201ENST00000530952 487 ntBASIC6.69□□□□□ -1.34
MSX2P35548 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
MSX2P35548 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.69□□□□□ -1.34
MSX2P35548 DCN-207ENST00000546370 586 ntTSL 3 BASIC6.69□□□□□ -1.34
MSX2P35548 CRADD-210ENST00000552033 622 ntTSL 3 BASIC6.69□□□□□ -1.34
MSX2P35548 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
MSX2P35548 TUBAP4-201ENST00000569261 416 ntBASIC6.69□□□□□ -1.34
MSX2P35548 RN7SL835P-201ENST00000579920 262 ntBASIC6.69□□□□□ -1.34
MSX2P35548 AC067852.5-201ENST00000589299 310 ntBASIC6.69□□□□□ -1.34
MSX2P35548 ZNF92P3-201ENST00000596594 954 ntBASIC6.69□□□□□ -1.34
MSX2P35548 AC234772.3-201ENST00000602277 528 ntBASIC6.69□□□□□ -1.34
MSX2P35548 AC129492.5-201ENST00000603489 315 ntBASIC6.69□□□□□ -1.34
MSX2P35548 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms