Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 AC106785.4-201ENST00000569492 412 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 AC004805.3-201ENST00000603178 310 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 AC105148.1-201ENST00000604961 409 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 AL023583.1-201ENST00000607518 1143 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 CXADRP3-202ENST00000617265 1100 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 U1.41-201ENST00000617626 165 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 AC131009.3-201ENST00000621809 287 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 AL683826.1-201ENST00000624104 627 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 AL121936.2-201ENST00000641935 662 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-DOAP06340 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-DOAP06340 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-DOAP06340 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-DOAP06340 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
HLA-DOAP06340 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HLA-DOAP06340 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 YWHAZP4-201ENST00000392459 708 ntBASIC7.84□□□□□ -1.15
HLA-DOAP06340 CCL7-202ENST00000394627 696 ntTSL 3 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 AL049697.3-201ENST00000406493 982 ntBASIC7.84□□□□□ -1.15
HLA-DOAP06340 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 SNORA74.1-201ENST00000516320 180 ntBASIC7.84□□□□□ -1.15
HLA-DOAP06340 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 AC115989.2-201ENST00000578640 563 ntBASIC7.84□□□□□ -1.15
HLA-DOAP06340 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.84□□□□□ -1.15
HLA-DOAP06340 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 AL122023.1-201ENST00000622847 530 ntBASIC7.84□□□□□ -1.15
HLA-DOAP06340 AC120057.5-201ENST00000623840 154 ntBASIC7.84□□□□□ -1.15
HLA-DOAP06340 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 AL021877.2-201ENST00000624442 10684 ntBASIC7.84□□□□□ -1.15
HLA-DOAP06340 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.84□□□□□ -1.15
HLA-DOAP06340 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HLA-DOAP06340 AC005702.3-201ENST00000585345 1447 ntBASIC7.84□□□□□ -1.15
HLA-DOAP06340 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
HLA-DOAP06340 NBPF8-201ENST00000583271 5330 ntBASIC7.84□□□□□ -1.15
HLA-DOAP06340 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HLA-DOAP06340 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HLA-DOAP06340 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.84□□□□□ -1.16
HLA-DOAP06340 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.84□□□□□ -1.16
HLA-DOAP06340 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
HLA-DOAP06340 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
HLA-DOAP06340 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 AP000568.1-201ENST00000282964 442 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 RNU1-65P-201ENST00000363919 148 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
HLA-DOAP06340 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
HLA-DOAP06340 MIR1275-201ENST00000408770 80 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 AL359092.1-201ENST00000417156 265 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 AC013470.3-201ENST00000420252 1194 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 HSFY1P1-201ENST00000423928 1178 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 AL354893.1-201ENST00000433735 348 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 CTSLP6-201ENST00000458273 1002 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 H3F3AP5-201ENST00000475267 429 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
HLA-DOAP06340 RPL19P11-201ENST00000495944 589 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 HMGN1P16-201ENST00000508308 283 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 Vault.2-201ENST00000516519 98 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 AC009729.1-201ENST00000548873 1133 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 AC084033.1-201ENST00000550830 633 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 AL162632.2-201ENST00000553933 399 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 AC244034.2-201ENST00000562504 509 ntBASIC7.83□□□□□ -1.16
HLA-DOAP06340 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
HLA-DOAP06340 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.83□□□□□ -1.16
HLA-DOAP06340 AC005277.2-201ENST00000617898 390 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms