Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 FCAR-201ENST00000345937 608 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 MT-TS1-201ENST00000387416 69 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 RNU11-6P-201ENST00000391127 133 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 FCAR-207ENST00000391725 830 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 DYNLL1-202ENST00000392508 697 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AL359643.1-201ENST00000404109 423 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 RNA5SP265-201ENST00000411023 111 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC012519.1-201ENST00000424588 610 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 TMX2P1-201ENST00000436507 708 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC104772.1-201ENST00000444764 862 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC103591.1-201ENST00000448345 556 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AL135929.1-201ENST00000449287 552 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 RSU1P1-201ENST00000453416 441 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 RPS19P7-201ENST00000455650 396 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 RN7SL36P-201ENST00000469345 276 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 RPL14P3-201ENST00000476715 622 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 RPS7P11-201ENST00000484240 586 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AL049874.2-201ENST00000492636 288 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 TTC26-210ENST00000495038 1599 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 LINC02434-201ENST00000502419 677 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 IGLV1-62-201ENST00000518003 441 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 PTS-204ENST00000525803 625 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 NDUFC2-205ENST00000534029 422 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 PROSER3-207ENST00000537459 772 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AP002373.2-201ENST00000541631 1060 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 LRRC37A13P-201ENST00000546055 287 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AL662884.1-201ENST00000559458 662 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 NMNAT1P5-201ENST00000559657 841 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 ARL2BP-202ENST00000562023 547 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 DNM1P34-202ENST00000567850 315 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC020779.2-201ENST00000568984 393 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC005154.4-201ENST00000579437 427 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 SMCO4P1-201ENST00000592909 177 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC008687.3-201ENST00000599209 598 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 BUB1P1-201ENST00000603541 607 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AL512638.3-201ENST00000620370 298 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 Six3os1_1.1-201ENST00000620900 87 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AL353649.1-201ENST00000625060 619 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 FMO10P-201ENST00000455032 1493 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 BMS1P1-201ENST00000374336 1332 ntBASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LINC01558Q9Y6Z2 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms