Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
USP35Q9P2H5 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
USP35Q9P2H5 AC092701.1-201ENST00000623627 1551 ntBASIC9.43□□□□□ -0.9
USP35Q9P2H5 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
USP35Q9P2H5 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
USP35Q9P2H5 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
USP35Q9P2H5 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 KRTAP3-4P-201ENST00000430780 280 ntBASIC9.43□□□□□ -0.9
USP35Q9P2H5 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 Z83313.1-201ENST00000433780 718 ntBASIC9.43□□□□□ -0.9
USP35Q9P2H5 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 RPL7AP71-201ENST00000451120 739 ntBASIC9.43□□□□□ -0.9
USP35Q9P2H5 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 RBM4-213ENST00000578778 582 ntTSL 4 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 RN7SL178P-201ENST00000582930 304 ntBASIC9.43□□□□□ -0.9
USP35Q9P2H5 BX322635.1-201ENST00000605804 496 ntBASIC9.43□□□□□ -0.9
USP35Q9P2H5 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 AC005514.1-201ENST00000623521 208 ntBASIC9.43□□□□□ -0.9
USP35Q9P2H5 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
USP35Q9P2H5 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 AL133320.1-201ENST00000621423 2352 ntBASIC9.43□□□□□ -0.9
USP35Q9P2H5 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
USP35Q9P2H5 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
USP35Q9P2H5 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
USP35Q9P2H5 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
USP35Q9P2H5 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 AC138915.4-201ENST00000565549 4147 ntBASIC9.42□□□□□ -0.9
USP35Q9P2H5 SPATA31B1P-201ENST00000434692 4016 ntBASIC9.42□□□□□ -0.9
USP35Q9P2H5 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
USP35Q9P2H5 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
USP35Q9P2H5 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
USP35Q9P2H5 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 AC010132.4-201ENST00000569883 1368 ntBASIC9.42□□□□□ -0.9
USP35Q9P2H5 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
USP35Q9P2H5 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
USP35Q9P2H5 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
USP35Q9P2H5 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 Z85994.2-201ENST00000434327 452 ntBASIC9.42□□□□□ -0.9
USP35Q9P2H5 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 LAPTM4BP1-201ENST00000447781 690 ntBASIC9.42□□□□□ -0.9
USP35Q9P2H5 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 RPL23AP8-201ENST00000479812 475 ntBASIC9.42□□□□□ -0.9
USP35Q9P2H5 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 AC010442.1-201ENST00000515583 816 ntBASIC9.42□□□□□ -0.9
USP35Q9P2H5 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
USP35Q9P2H5 AC087272.1-201ENST00000523624 533 ntBASIC9.42□□□□□ -0.9
USP35Q9P2H5 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
USP35Q9P2H5 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
USP35Q9P2H5 GNG2-203ENST00000553432 577 ntTSL 4 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 AC010547.7-201ENST00000570323 333 ntBASIC9.42□□□□□ -0.9
USP35Q9P2H5 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 AC111152.1-202ENST00000635848 339 ntBASIC9.42□□□□□ -0.9
USP35Q9P2H5 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
USP35Q9P2H5 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
USP35Q9P2H5 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
USP35Q9P2H5 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
USP35Q9P2H5 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
USP35Q9P2H5 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
USP35Q9P2H5 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
USP35Q9P2H5 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
USP35Q9P2H5 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC9.41□□□□□ -0.9
USP35Q9P2H5 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC9.41□□□□□ -0.9
USP35Q9P2H5 AL929601.4-201ENST00000613011 1341 ntBASIC9.41□□□□□ -0.9
USP35Q9P2H5 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
USP35Q9P2H5 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
USP35Q9P2H5 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC9.41□□□□□ -0.9
USP35Q9P2H5 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
USP35Q9P2H5 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
USP35Q9P2H5 RNA5SP279-201ENST00000365513 117 ntBASIC9.41□□□□□ -0.9
USP35Q9P2H5 MIR640-201ENST00000385086 96 ntBASIC9.41□□□□□ -0.9
USP35Q9P2H5 AC244452.1-201ENST00000413798 141 ntBASIC9.41□□□□□ -0.9
USP35Q9P2H5 MTND2P12-201ENST00000417560 1252 ntBASIC9.41□□□□□ -0.9
USP35Q9P2H5 RPL12P43-201ENST00000420608 499 ntBASIC9.41□□□□□ -0.9
USP35Q9P2H5 ETF1P1-206ENST00000427296 984 ntBASIC9.41□□□□□ -0.9
USP35Q9P2H5 RSL24D1P8-201ENST00000434442 492 ntBASIC9.41□□□□□ -0.9
USP35Q9P2H5 RPSAP40-201ENST00000442343 891 ntBASIC9.41□□□□□ -0.9
USP35Q9P2H5 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
USP35Q9P2H5 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC9.41□□□□□ -0.9
USP35Q9P2H5 DPPA3P2-201ENST00000553589 478 ntBASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms