Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PMS1P54277 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.79□□□□□ -1.16
PMS1P54277 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.79□□□□□ -1.16
PMS1P54277 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PMS1P54277 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.78□□□□□ -1.16
PMS1P54277 MFSD8-256ENST00000641949 1640 ntBASIC7.78□□□□□ -1.16
PMS1P54277 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
PMS1P54277 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
PMS1P54277 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PMS1P54277 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
PMS1P54277 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
PMS1P54277 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PMS1P54277 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
PMS1P54277 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
PMS1P54277 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
PMS1P54277 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
PMS1P54277 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PMS1P54277 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.78□□□□□ -1.16
PMS1P54277 AC093107.1-201ENST00000422772 609 ntBASIC7.78□□□□□ -1.16
PMS1P54277 UQCRHP1-204ENST00000424609 274 ntBASIC7.78□□□□□ -1.16
PMS1P54277 NPM1P25-201ENST00000429734 854 ntBASIC7.78□□□□□ -1.16
PMS1P54277 RPL12P28-201ENST00000430852 489 ntBASIC7.78□□□□□ -1.16
PMS1P54277 VDAC2P3-201ENST00000430995 828 ntBASIC7.78□□□□□ -1.16
PMS1P54277 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC7.78□□□□□ -1.16
PMS1P54277 AC092647.3-201ENST00000443044 633 ntBASIC7.78□□□□□ -1.16
PMS1P54277 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC7.78□□□□□ -1.16
PMS1P54277 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PMS1P54277 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC7.78□□□□□ -1.16
PMS1P54277 AC079594.1-201ENST00000489757 331 ntBASIC7.78□□□□□ -1.16
PMS1P54277 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC7.78□□□□□ -1.16
PMS1P54277 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC7.78□□□□□ -1.16
PMS1P54277 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC7.78□□□□□ -1.16
PMS1P54277 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PMS1P54277 AC112673.1-201ENST00000513168 575 ntBASIC7.78□□□□□ -1.16
PMS1P54277 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.78□□□□□ -1.16
PMS1P54277 AC010376.1-201ENST00000522101 334 ntBASIC7.78□□□□□ -1.16
PMS1P54277 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.78□□□□□ -1.16
PMS1P54277 AC005000.1-201ENST00000536192 288 ntBASIC7.78□□□□□ -1.16
PMS1P54277 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC7.78□□□□□ -1.16
PMS1P54277 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC7.78□□□□□ -1.16
PMS1P54277 BMS1P8-201ENST00000565049 1178 ntBASIC7.78□□□□□ -1.16
PMS1P54277 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC7.78□□□□□ -1.16
PMS1P54277 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC7.78□□□□□ -1.16
PMS1P54277 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.78□□□□□ -1.16
PMS1P54277 MIMT1-201ENST00000597105 1050 ntBASIC7.78□□□□□ -1.16
PMS1P54277 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
PMS1P54277 AC013444.2-201ENST00000603317 787 ntBASIC7.78□□□□□ -1.16
PMS1P54277 AC064807.4-201ENST00000607201 407 ntBASIC7.78□□□□□ -1.16
PMS1P54277 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC7.78□□□□□ -1.16
PMS1P54277 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
PMS1P54277 RNU6-1192P-201ENST00000612197 107 ntBASIC7.78□□□□□ -1.16
PMS1P54277 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.78□□□□□ -1.16
PMS1P54277 RNU6-489P-201ENST00000618289 107 ntBASIC7.78□□□□□ -1.16
PMS1P54277 AL645927.2-201ENST00000618350 349 ntBASIC7.78□□□□□ -1.16
PMS1P54277 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PMS1P54277 AC068620.4-201ENST00000636730 1182 ntBASIC7.78□□□□□ -1.16
PMS1P54277 AC132825.7-201ENST00000638744 335 ntBASIC7.78□□□□□ -1.16
PMS1P54277 OR5AU1-204ENST00000641822 1197 ntBASIC7.78□□□□□ -1.16
PMS1P54277 OR7E161P-202ENST00000641994 1033 ntBASIC7.78□□□□□ -1.16
PMS1P54277 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PMS1P54277 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.78□□□□□ -1.16
PMS1P54277 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.78□□□□□ -1.16
PMS1P54277 AC067942.1-201ENST00000488045 1493 ntBASIC7.78□□□□□ -1.16
PMS1P54277 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.78□□□□□ -1.16
PMS1P54277 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PMS1P54277 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.78□□□□□ -1.16
PMS1P54277 AC062029.1-202ENST00000606164 3651 ntBASIC7.78□□□□□ -1.16
PMS1P54277 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
PMS1P54277 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PMS1P54277 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PMS1P54277 AP002800.1-201ENST00000624982 2225 ntBASIC7.78□□□□□ -1.16
PMS1P54277 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.77□□□□□ -1.16
PMS1P54277 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
PMS1P54277 AC091544.5-201ENST00000620192 3815 ntBASIC7.77□□□□□ -1.17
PMS1P54277 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PMS1P54277 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
PMS1P54277 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.77□□□□□ -1.17
PMS1P54277 AL353898.3-201ENST00000624679 1755 ntBASIC7.77□□□□□ -1.17
PMS1P54277 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.77□□□□□ -1.17
PMS1P54277 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PMS1P54277 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PMS1P54277 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.77□□□□□ -1.17
PMS1P54277 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PMS1P54277 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
PMS1P54277 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
PMS1P54277 RNA5SP172-201ENST00000365061 118 ntBASIC7.77□□□□□ -1.17
PMS1P54277 SNORA30B-201ENST00000365319 129 ntBASIC7.77□□□□□ -1.17
PMS1P54277 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.77□□□□□ -1.17
PMS1P54277 RPL22P22-201ENST00000395439 379 ntBASIC7.77□□□□□ -1.17
PMS1P54277 AP002530.1-201ENST00000405705 684 ntBASIC7.77□□□□□ -1.17
PMS1P54277 RPSAP44-201ENST00000406712 884 ntBASIC7.77□□□□□ -1.17
PMS1P54277 RN7SKP236-201ENST00000410635 284 ntBASIC7.77□□□□□ -1.17
PMS1P54277 MTCO2P21-201ENST00000419780 677 ntBASIC7.77□□□□□ -1.17
PMS1P54277 AC013268.2-201ENST00000420753 337 ntBASIC7.77□□□□□ -1.17
PMS1P54277 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.77□□□□□ -1.17
PMS1P54277 ARAFP1-201ENST00000422172 605 ntBASIC7.77□□□□□ -1.17
PMS1P54277 PPIL1P1-201ENST00000423936 499 ntBASIC7.77□□□□□ -1.17
PMS1P54277 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
PMS1P54277 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC7.77□□□□□ -1.17
PMS1P54277 PHBP4-201ENST00000437447 837 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms