Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDX1P47902 RNA5SP251-201ENST00000410614 137 ntBASIC5.64□□□□□ -1.51
CDX1P47902 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDX1P47902 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDX1P47902 AL593856.1-201ENST00000419949 805 ntBASIC5.64□□□□□ -1.51
CDX1P47902 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.64□□□□□ -1.51
CDX1P47902 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDX1P47902 AL161626.1-201ENST00000441480 490 ntBASIC5.64□□□□□ -1.51
CDX1P47902 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC5.64□□□□□ -1.51
CDX1P47902 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.64□□□□□ -1.51
CDX1P47902 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.64□□□□□ -1.51
CDX1P47902 RN7SL392P-201ENST00000473024 299 ntBASIC5.64□□□□□ -1.51
CDX1P47902 RPL7AP30-201ENST00000482859 796 ntBASIC5.64□□□□□ -1.51
CDX1P47902 AC025271.1-201ENST00000485045 429 ntBASIC5.64□□□□□ -1.51
CDX1P47902 MTND3P6-201ENST00000485242 339 ntBASIC5.64□□□□□ -1.51
CDX1P47902 RN7SL776P-201ENST00000493390 268 ntBASIC5.64□□□□□ -1.51
CDX1P47902 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.64□□□□□ -1.51
CDX1P47902 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.64□□□□□ -1.51
CDX1P47902 AC027801.3-201ENST00000515049 698 ntBASIC5.64□□□□□ -1.51
CDX1P47902 Vault.2-201ENST00000516519 98 ntBASIC5.64□□□□□ -1.51
CDX1P47902 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
CDX1P47902 AP003084.1-201ENST00000524828 742 ntBASIC5.64□□□□□ -1.51
CDX1P47902 AC126177.6-201ENST00000550420 1009 ntBASIC5.64□□□□□ -1.51
CDX1P47902 AC023080.1-201ENST00000551663 931 ntBASIC5.64□□□□□ -1.51
CDX1P47902 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.64□□□□□ -1.51
CDX1P47902 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.64□□□□□ -1.51
CDX1P47902 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.64□□□□□ -1.51
CDX1P47902 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC5.64□□□□□ -1.51
CDX1P47902 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC5.64□□□□□ -1.51
CDX1P47902 EEF1B2P1-201ENST00000567221 672 ntBASIC5.64□□□□□ -1.51
CDX1P47902 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC5.64□□□□□ -1.51
CDX1P47902 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC5.64□□□□□ -1.51
CDX1P47902 RN7SL178P-201ENST00000582930 304 ntBASIC5.64□□□□□ -1.51
CDX1P47902 RPSAP66-201ENST00000592196 606 ntBASIC5.64□□□□□ -1.51
CDX1P47902 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC5.64□□□□□ -1.51
CDX1P47902 AC010463.3-201ENST00000594077 500 ntBASIC5.64□□□□□ -1.51
CDX1P47902 AL078624.2-201ENST00000605063 554 ntBASIC5.64□□□□□ -1.51
CDX1P47902 AC091167.5-201ENST00000605689 894 ntBASIC5.64□□□□□ -1.51
CDX1P47902 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.64□□□□□ -1.51
CDX1P47902 AC010998.3-201ENST00000613871 631 ntBASIC5.64□□□□□ -1.51
CDX1P47902 AL391597.1-201ENST00000618707 694 ntBASIC5.64□□□□□ -1.51
CDX1P47902 AC034229.6-201ENST00000623704 224 ntBASIC5.64□□□□□ -1.51
CDX1P47902 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.64□□□□□ -1.51
CDX1P47902 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDX1P47902 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDX1P47902 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
CDX1P47902 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDX1P47902 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDX1P47902 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDX1P47902 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDX1P47902 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDX1P47902 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDX1P47902 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDX1P47902 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
CDX1P47902 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDX1P47902 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.63□□□□□ -1.51
CDX1P47902 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDX1P47902 ASNSP6-201ENST00000592770 1618 ntBASIC5.63□□□□□ -1.51
CDX1P47902 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDX1P47902 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDX1P47902 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CDX1P47902 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDX1P47902 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.63□□□□□ -1.51
CDX1P47902 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC5.63□□□□□ -1.51
CDX1P47902 AL157831.2-201ENST00000564681 3095 ntBASIC5.63□□□□□ -1.51
CDX1P47902 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDX1P47902 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC5.63□□□□□ -1.51
CDX1P47902 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CDX1P47902 AC020978.6-201ENST00000571197 3177 ntBASIC5.63□□□□□ -1.51
CDX1P47902 RPL12P13-201ENST00000310055 497 ntBASIC5.63□□□□□ -1.51
CDX1P47902 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDX1P47902 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDX1P47902 RNU12-2P-201ENST00000364789 156 ntBASIC5.63□□□□□ -1.51
CDX1P47902 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.63□□□□□ -1.51
CDX1P47902 MIR27A-201ENST00000385073 78 ntBASIC5.63□□□□□ -1.51
CDX1P47902 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDX1P47902 FAUP2-201ENST00000394301 401 ntBASIC5.63□□□□□ -1.51
CDX1P47902 RN7SKP38-201ENST00000410782 309 ntBASIC5.63□□□□□ -1.51
CDX1P47902 RN7SKP137-201ENST00000411074 307 ntBASIC5.63□□□□□ -1.51
CDX1P47902 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.63□□□□□ -1.51
CDX1P47902 AL627308.2-201ENST00000420014 432 ntBASIC5.63□□□□□ -1.51
CDX1P47902 OR5W1P-201ENST00000423705 938 ntBASIC5.63□□□□□ -1.51
CDX1P47902 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.63□□□□□ -1.51
CDX1P47902 RPL29P7-201ENST00000440227 457 ntBASIC5.63□□□□□ -1.51
CDX1P47902 AC009237.4-201ENST00000441078 238 ntBASIC5.63□□□□□ -1.51
CDX1P47902 EIF3LP2-201ENST00000457262 807 ntBASIC5.63□□□□□ -1.51
CDX1P47902 HMGN1P8-201ENST00000463578 288 ntBASIC5.63□□□□□ -1.51
CDX1P47902 TUBBP11-201ENST00000472255 252 ntBASIC5.63□□□□□ -1.51
CDX1P47902 MYL6P4-201ENST00000477911 453 ntBASIC5.63□□□□□ -1.51
CDX1P47902 RN7SL775P-201ENST00000498361 336 ntBASIC5.63□□□□□ -1.51
CDX1P47902 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.63□□□□□ -1.51
CDX1P47902 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC5.63□□□□□ -1.51
CDX1P47902 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDX1P47902 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.63□□□□□ -1.51
CDX1P47902 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.63□□□□□ -1.51
CDX1P47902 AP001804.1-201ENST00000526868 919 ntBASIC5.63□□□□□ -1.51
CDX1P47902 PDCL3P1-201ENST00000534575 734 ntBASIC5.63□□□□□ -1.51
CDX1P47902 SLC25A51P2-201ENST00000535708 889 ntBASIC5.63□□□□□ -1.51
CDX1P47902 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.63□□□□□ -1.51
CDX1P47902 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms