Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MIR4786-201ENST00000583954 80 ntBASIC7.2□□□□□ -1.26
SSR1P43307 AC092032.1-201ENST00000603090 165 ntBASIC7.2□□□□□ -1.26
SSR1P43307 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.2□□□□□ -1.26
SSR1P43307 AP003789.1-201ENST00000617737 605 ntBASIC7.2□□□□□ -1.26
SSR1P43307 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
SSR1P43307 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.2□□□□□ -1.26
SSR1P43307 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.2□□□□□ -1.26
SSR1P43307 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SSR1P43307 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.2□□□□□ -1.26
SSR1P43307 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SSR1P43307 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
SSR1P43307 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SSR1P43307 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.2□□□□□ -1.26
SSR1P43307 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SSR1P43307 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SSR1P43307 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC7.19□□□□□ -1.26
SSR1P43307 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
SSR1P43307 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSR1P43307 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SSR1P43307 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSR1P43307 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.19□□□□□ -1.26
SSR1P43307 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSR1P43307 DLD-205ENST00000440410 1993 ntTSL 2 BASIC7.19□□□□□ -1.26
SSR1P43307 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7.19□□□□□ -1.26
SSR1P43307 RNU12-2P-201ENST00000364789 156 ntBASIC7.19□□□□□ -1.26
SSR1P43307 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.19□□□□□ -1.26
SSR1P43307 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.19□□□□□ -1.26
SSR1P43307 MYB-206ENST00000420123 1051 ntTSL 5 BASIC7.19□□□□□ -1.26
SSR1P43307 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SSR1P43307 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC7.19□□□□□ -1.26
SSR1P43307 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC7.19□□□□□ -1.26
SSR1P43307 OR52U1P-201ENST00000439752 923 ntBASIC7.19□□□□□ -1.26
SSR1P43307 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.19□□□□□ -1.26
SSR1P43307 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.19□□□□□ -1.26
SSR1P43307 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.19□□□□□ -1.26
SSR1P43307 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.19□□□□□ -1.26
SSR1P43307 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.19□□□□□ -1.26
SSR1P43307 AL591767.3-201ENST00000554632 525 ntBASIC7.19□□□□□ -1.26
SSR1P43307 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.19□□□□□ -1.26
SSR1P43307 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC7.19□□□□□ -1.26
SSR1P43307 MIR4301-201ENST00000577203 66 ntBASIC7.19□□□□□ -1.26
SSR1P43307 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.19□□□□□ -1.26
SSR1P43307 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC7.19□□□□□ -1.26
SSR1P43307 AC020914.7-201ENST00000594477 545 ntBASIC7.19□□□□□ -1.26
SSR1P43307 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC7.19□□□□□ -1.26
SSR1P43307 AC007255.2-201ENST00000604053 631 ntBASIC7.19□□□□□ -1.26
SSR1P43307 AC092960.1-201ENST00000604762 351 ntBASIC7.19□□□□□ -1.26
SSR1P43307 MIR6726-201ENST00000613751 61 ntBASIC7.19□□□□□ -1.26
SSR1P43307 AC073263.3-201ENST00000624449 858 ntBASIC7.19□□□□□ -1.26
SSR1P43307 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
SSR1P43307 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SSR1P43307 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.19□□□□□ -1.26
SSR1P43307 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSR1P43307 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC7.19□□□□□ -1.26
SSR1P43307 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.19□□□□□ -1.26
SSR1P43307 AL449283.1-201ENST00000602631 3403 ntBASIC7.18□□□□□ -1.26
SSR1P43307 HSPD1P1-201ENST00000503199 1726 ntBASIC7.18□□□□□ -1.26
SSR1P43307 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.18□□□□□ -1.26
SSR1P43307 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
SSR1P43307 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SSR1P43307 AL157831.2-201ENST00000564681 3095 ntBASIC7.18□□□□□ -1.26
SSR1P43307 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SSR1P43307 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SSR1P43307 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
SSR1P43307 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SSR1P43307 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SSR1P43307 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SSR1P43307 NPM1P31-201ENST00000399021 764 ntBASIC7.18□□□□□ -1.26
SSR1P43307 AL359633.1-201ENST00000421403 310 ntBASIC7.18□□□□□ -1.26
SSR1P43307 GRPEL2P2-201ENST00000421856 670 ntBASIC7.18□□□□□ -1.26
SSR1P43307 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.18□□□□□ -1.26
SSR1P43307 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC7.18□□□□□ -1.26
SSR1P43307 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
SSR1P43307 MYL6P3-201ENST00000436904 432 ntBASIC7.18□□□□□ -1.26
SSR1P43307 AC019185.3-201ENST00000438805 323 ntBASIC7.18□□□□□ -1.26
SSR1P43307 CYCSP51-201ENST00000443545 318 ntBASIC7.18□□□□□ -1.26
SSR1P43307 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SSR1P43307 TVP23CP1-201ENST00000450317 639 ntBASIC7.18□□□□□ -1.26
SSR1P43307 BZW1P1-201ENST00000454901 1240 ntBASIC7.18□□□□□ -1.26
SSR1P43307 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.18□□□□□ -1.26
SSR1P43307 RN7SL518P-201ENST00000491887 280 ntBASIC7.18□□□□□ -1.26
SSR1P43307 RPS26P24-201ENST00000497656 331 ntBASIC7.18□□□□□ -1.26
SSR1P43307 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.18□□□□□ -1.26
SSR1P43307 RN7SKP242-201ENST00000515967 289 ntBASIC7.18□□□□□ -1.26
SSR1P43307 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.18□□□□□ -1.26
SSR1P43307 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.18□□□□□ -1.26
SSR1P43307 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SSR1P43307 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC7.18□□□□□ -1.26
SSR1P43307 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.18□□□□□ -1.26
SSR1P43307 RN7SL697P-201ENST00000582484 299 ntBASIC7.18□□□□□ -1.26
SSR1P43307 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SSR1P43307 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SSR1P43307 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SSR1P43307 NEK2P4-201ENST00000425793 1329 ntBASIC7.18□□□□□ -1.26
SSR1P43307 AL512310.3-201ENST00000547023 1335 ntBASIC7.18□□□□□ -1.26
SSR1P43307 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SSR1P43307 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.18□□□□□ -1.26
SSR1P43307 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
SSR1P43307 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.18□□□□□ -1.26
SSR1P43307 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms