Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6□□□□□ -1.45
HLA-DOBP13765 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
HLA-DOBP13765 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOBP13765 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 MIPEPP2-201ENST00000422560 1819 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOBP13765 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOBP13765 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOBP13765 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOBP13765 AC107980.1-201ENST00000558671 3355 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOBP13765 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOBP13765 OR2M1P-201ENST00000318104 951 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 MRPL32P1-201ENST00000406301 247 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 MTND3P20-201ENST00000407663 186 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 AL136100.1-201ENST00000407696 330 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 SNORA81-201ENST00000408493 178 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 RN7SKP38-201ENST00000410782 309 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 RN7SKP91-201ENST00000410852 288 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 AC096537.2-201ENST00000413707 714 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 AL713922.1-201ENST00000416477 747 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 AC000089.1-201ENST00000424559 801 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 RPS10P21-201ENST00000430654 475 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 BTBD7P2-201ENST00000441962 620 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 AC130366.1-201ENST00000526505 1192 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 AP003168.1-201ENST00000530091 307 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 ACER3-213ENST00000533873 929 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 SETP17-201ENST00000534163 817 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 SNRPGP1-201ENST00000553864 222 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 AL109628.1-201ENST00000556877 366 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 AC011921.2-201ENST00000589465 152 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 AC010615.3-201ENST00000597319 394 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 AL359704.2-201ENST00000604335 521 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 AL133406.3-201ENST00000606817 541 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOBP13765 AC027506.1-201ENST00000621395 198 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 AL450226.2-201ENST00000622913 439 ntBASIC5.99□□□□□ -1.45
HLA-DOBP13765 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOBP13765 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOBP13765 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOBP13765 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOBP13765 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DOBP13765 AL589993.1-201ENST00000407450 2524 ntBASIC5.98□□□□□ -1.45
HLA-DOBP13765 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DOBP13765 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.98□□□□□ -1.45
HLA-DOBP13765 FO082842.1-201ENST00000423552 1370 ntBASIC5.98□□□□□ -1.45
HLA-DOBP13765 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DOBP13765 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HLA-DOBP13765 AL359694.1-201ENST00000403247 604 ntBASIC5.98□□□□□ -1.45
HLA-DOBP13765 AL590635.1-201ENST00000406314 586 ntBASIC5.98□□□□□ -1.45
HLA-DOBP13765 RPLP1P10-201ENST00000413972 339 ntBASIC5.98□□□□□ -1.45
HLA-DOBP13765 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DOBP13765 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HLA-DOBP13765 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DOBP13765 RPS7P12-201ENST00000422385 582 ntBASIC5.98□□□□□ -1.45
HLA-DOBP13765 FABP5P1-201ENST00000423401 411 ntBASIC5.98□□□□□ -1.45
HLA-DOBP13765 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DOBP13765 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DOBP13765 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DOBP13765 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.98□□□□□ -1.45
HLA-DOBP13765 FABP5P2-201ENST00000439042 408 ntBASIC5.98□□□□□ -1.45
HLA-DOBP13765 RPS10P14-201ENST00000440748 502 ntBASIC5.98□□□□□ -1.45
HLA-DOBP13765 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.98□□□□□ -1.45
HLA-DOBP13765 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.98□□□□□ -1.45
HLA-DOBP13765 FCF1P7-201ENST00000451185 558 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms