Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 HSD17B7P1-201ENST00000412419 1017 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AHCYP8-201ENST00000425108 209 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 PTMAP1-205ENST00000455552 325 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 IGLVVII-41-1-201ENST00000518405 151 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC009879.1-201ENST00000520029 839 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC008555.7-201ENST00000605008 583 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 RNA5SP77-201ENST00000365394 120 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AL158068.1-201ENST00000506116 616 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC130456.6-201ENST00000623745 765 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 PPIAP26-201ENST00000377951 522 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 GTF3AP6-201ENST00000432585 986 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 RPL5P7-201ENST00000444235 813 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AKR1D1P1-201ENST00000457236 936 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 RPL23P10-201ENST00000468780 412 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 IGKV2D-38-201ENST00000518423 240 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 IGHVIII-26-1-201ENST00000520387 250 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 TBCA-209ENST00000522370 435 ntTSL 3 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 TRIM77BP-201ENST00000524985 1119 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 DRG1-207ENST00000629688 309 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 UOX-205ENST00000640983 544 ntTSL 4 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 RNU1-65P-201ENST00000363919 148 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC121334.1-201ENST00000396414 802 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AL121835.1-201ENST00000404250 354 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC007679.3-201ENST00000434035 414 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC118758.1-202ENST00000454719 225 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 ASB8-203ENST00000535988 679 ntTSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AL512356.3-201ENST00000623005 461 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC114546.4-201ENST00000624413 369 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 Z82209.2-201ENST00000623410 2012 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 YWHAZP4-201ENST00000392459 708 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC108479.1-201ENST00000431142 427 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms