Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC005242.1-201ENST00000585658 438 ntBASIC6.4□□□□□ -1.38
CLRN1P58418 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CLRN1P58418 AL023806.2-201ENST00000603042 263 ntBASIC6.4□□□□□ -1.38
CLRN1P58418 AP001554.1-201ENST00000604533 376 ntBASIC6.4□□□□□ -1.38
CLRN1P58418 AL096803.3-201ENST00000609032 532 ntBASIC6.4□□□□□ -1.38
CLRN1P58418 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.4□□□□□ -1.38
CLRN1P58418 AC005393.1-201ENST00000617916 584 ntBASIC6.4□□□□□ -1.38
CLRN1P58418 uc_338.37-201ENST00000620113 186 ntBASIC6.4□□□□□ -1.38
CLRN1P58418 MIR6807-201ENST00000621968 92 ntBASIC6.4□□□□□ -1.38
CLRN1P58418 AC016542.3-201ENST00000623520 619 ntBASIC6.4□□□□□ -1.38
CLRN1P58418 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.4□□□□□ -1.38
CLRN1P58418 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.4□□□□□ -1.38
CLRN1P58418 OR5AU1-204ENST00000641822 1197 ntBASIC6.4□□□□□ -1.38
CLRN1P58418 MFSD8-217ENST00000641178 4374 ntBASIC6.4□□□□□ -1.38
CLRN1P58418 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
CLRN1P58418 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLRN1P58418 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLRN1P58418 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.4□□□□□ -1.39
CLRN1P58418 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.4□□□□□ -1.39
CLRN1P58418 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.4□□□□□ -1.39
CLRN1P58418 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.4□□□□□ -1.39
CLRN1P58418 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLRN1P58418 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC6.4□□□□□ -1.39
CLRN1P58418 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.4□□□□□ -1.39
CLRN1P58418 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CLRN1P58418 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
CLRN1P58418 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLRN1P58418 AL359694.2-201ENST00000567753 1615 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CLRN1P58418 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.39□□□□□ -1.39
CLRN1P58418 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.39□□□□□ -1.39
CLRN1P58418 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.39□□□□□ -1.39
CLRN1P58418 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.39□□□□□ -1.39
CLRN1P58418 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CLRN1P58418 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
CLRN1P58418 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CLRN1P58418 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CLRN1P58418 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 RNU6-1331P-201ENST00000363658 106 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 MTND4P13-201ENST00000402078 1023 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.39□□□□□ -1.39
CLRN1P58418 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC6.39□□□□□ -1.39
CLRN1P58418 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 RBM22P7-201ENST00000421321 280 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 UQCRHP1-204ENST00000424609 274 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.39□□□□□ -1.39
CLRN1P58418 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.39□□□□□ -1.39
CLRN1P58418 MTCO2P20-201ENST00000437339 673 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 DEFA11P-201ENST00000446470 261 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.39□□□□□ -1.39
CLRN1P58418 PRDX1P1-201ENST00000449329 596 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 RPL7P61-201ENST00000451721 751 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 AC093799.1-201ENST00000452411 499 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 RSU1P1-201ENST00000453416 441 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 OR13C1P-201ENST00000457612 963 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC6.39□□□□□ -1.39
CLRN1P58418 AC069306.1-201ENST00000507006 843 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 HMGN1P17-201ENST00000513734 295 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.39□□□□□ -1.39
CLRN1P58418 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.39□□□□□ -1.39
CLRN1P58418 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.39□□□□□ -1.39
CLRN1P58418 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC6.39□□□□□ -1.39
CLRN1P58418 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.39□□□□□ -1.39
CLRN1P58418 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
CLRN1P58418 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC6.39□□□□□ -1.39
CLRN1P58418 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.39□□□□□ -1.39
CLRN1P58418 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.39□□□□□ -1.39
CLRN1P58418 AC011492.1-201ENST00000600023 315 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CLRN1P58418 AC093783.1-201ENST00000612976 329 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.39□□□□□ -1.39
CLRN1P58418 MIR6737-201ENST00000617385 70 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 AC022079.1-201ENST00000621546 602 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 AC006963.1-201ENST00000624003 1052 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.39□□□□□ -1.39
CLRN1P58418 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.39□□□□□ -1.39
CLRN1P58418 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.39□□□□□ -1.39
CLRN1P58418 AL596275.2-203ENST00000641951 371 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
CLRN1P58418 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.39□□□□□ -1.39
CLRN1P58418 AL162171.3-201ENST00000617439 3178 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CLRN1P58418 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC6.39□□□□□ -1.39
CLRN1P58418 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLRN1P58418 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.39□□□□□ -1.39
CLRN1P58418 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.39□□□□□ -1.39
CLRN1P58418 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms