Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
HMGB1P09429 PRNCR1-201ENST00000635449 12727 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC8.34□□□□□ -1.07
HMGB1P09429 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.34□□□□□ -1.07
HMGB1P09429 AL359195.2-201ENST00000623657 4412 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
HMGB1P09429 NPM1P14-201ENST00000343743 866 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.34□□□□□ -1.07
HMGB1P09429 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC8.34□□□□□ -1.07
HMGB1P09429 GAPDHP57-201ENST00000424400 585 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 PRKAR1AP1-201ENST00000441422 1162 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC8.34□□□□□ -1.07
HMGB1P09429 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC8.34□□□□□ -1.07
HMGB1P09429 RPLP0P1-201ENST00000457002 361 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 AC135721.2-201ENST00000464237 300 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC8.34□□□□□ -1.07
HMGB1P09429 NACAP6-201ENST00000509572 622 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC8.34□□□□□ -1.07
HMGB1P09429 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
HMGB1P09429 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.34□□□□□ -1.07
HMGB1P09429 AP000859.1-201ENST00000525536 307 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC8.34□□□□□ -1.07
HMGB1P09429 OR5M6P-201ENST00000530227 937 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC8.34□□□□□ -1.07
HMGB1P09429 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC8.34□□□□□ -1.07
HMGB1P09429 FXNP1-201ENST00000555153 337 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 AL132640.2-202ENST00000559732 614 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 AC122134.1-201ENST00000565664 1104 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 ACTG1P15-201ENST00000570019 1063 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC8.34□□□□□ -1.07
HMGB1P09429 AC005070.2-201ENST00000604391 260 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 AC084036.1-201ENST00000609190 508 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 MIR6726-201ENST00000613751 61 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 AL450226.2-201ENST00000622913 439 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HMGB1P09429 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HMGB1P09429 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HMGB1P09429 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HMGB1P09429 OR51C1P-202ENST00000641159 1444 ntBASIC8.34□□□□□ -1.07
HMGB1P09429 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HMGB1P09429 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HMGB1P09429 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
HMGB1P09429 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC8.34□□□□□ -1.07
HMGB1P09429 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
HMGB1P09429 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.08
HMGB1P09429 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC8.34□□□□□ -1.08
HMGB1P09429 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HMGB1P09429 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HMGB1P09429 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC8.33□□□□□ -1.08
HMGB1P09429 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
HMGB1P09429 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
HMGB1P09429 AL353743.3-201ENST00000442109 1468 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HMGB1P09429 DDX43P1-201ENST00000510713 1763 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC8.33□□□□□ -1.08
HMGB1P09429 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HMGB1P09429 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
HMGB1P09429 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.33□□□□□ -1.08
HMGB1P09429 U3.14-201ENST00000365363 227 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 EEF1B2P8-201ENST00000414101 671 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC8.33□□□□□ -1.08
HMGB1P09429 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC8.33□□□□□ -1.08
HMGB1P09429 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC8.33□□□□□ -1.08
HMGB1P09429 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC8.33□□□□□ -1.08
HMGB1P09429 RBMY3AP-201ENST00000449381 1145 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 PCMTD1P3-201ENST00000451824 472 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
HMGB1P09429 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.33□□□□□ -1.08
HMGB1P09429 RPL23AP8-201ENST00000479812 475 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 ANK3-213ENST00000486349 493 ntTSL 2 BASIC8.33□□□□□ -1.08
HMGB1P09429 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC8.33□□□□□ -1.08
HMGB1P09429 RPS23-208ENST00000512493 443 ntTSL 3 BASIC8.33□□□□□ -1.08
HMGB1P09429 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC8.33□□□□□ -1.08
HMGB1P09429 EEF1B2P2-201ENST00000519625 676 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC8.33□□□□□ -1.08
HMGB1P09429 AP001803.1-201ENST00000525668 147 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 OR4A21P-201ENST00000532759 944 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC8.33□□□□□ -1.08
HMGB1P09429 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC8.33□□□□□ -1.08
HMGB1P09429 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC8.33□□□□□ -1.08
HMGB1P09429 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HMGB1P09429 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC8.33□□□□□ -1.08
HMGB1P09429 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC8.33□□□□□ -1.08
HMGB1P09429 AC024614.1-201ENST00000577546 307 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 EXOSC3P2-201ENST00000594464 497 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 AC019131.2-201ENST00000609071 870 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 AC026951.2-201ENST00000613847 241 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 AC073575.2-201ENST00000614212 627 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 AC034229.6-201ENST00000623704 224 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC8.33□□□□□ -1.08
HMGB1P09429 AC104820.1-201ENST00000624183 307 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC8.33□□□□□ -1.08
HMGB1P09429 FKBP1AP4-201ENST00000631775 336 ntBASIC8.33□□□□□ -1.08
HMGB1P09429 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC8.33□□□□□ -1.08
HMGB1P09429 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
HMGB1P09429 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC8.33□□□□□ -1.08
HMGB1P09429 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
HMGB1P09429 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
HMGB1P09429 AC104162.1-201ENST00000430831 2382 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms