Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 SSXP3-201ENST00000442971 1300 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
C9orf40Q8IXQ3 AC093829.1-201ENST00000506662 1618 ntBASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AL596244.1-201ENST00000567068 3779 ntBASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 MIR640-201ENST00000385086 96 ntBASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AC096537.2-201ENST00000413707 714 ntBASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AL596268.1-201ENST00000427910 1048 ntBASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 VN1R53P-201ENST00000429536 957 ntBASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 GAPDHP33-201ENST00000443168 1013 ntBASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AC011742.2-201ENST00000443818 352 ntBASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 UBBP5-201ENST00000446970 266 ntBASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 SULT1D1P-201ENST00000458020 882 ntBASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 OR4A13P-201ENST00000529316 942 ntBASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AC084851.2-201ENST00000530377 364 ntBASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AC245052.7-201ENST00000601161 359 ntBASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 SNORD96A-201ENST00000606577 79 ntBASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AC018692.2-201ENST00000624130 348 ntBASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AC016542.2-201ENST00000624201 619 ntBASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
C9orf40Q8IXQ3 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AC083806.2-201ENST00000617795 2685 ntBASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AL133243.4-201ENST00000623116 3109 ntBASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 PPIAP24-201ENST00000328558 471 ntBASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AL033519.1-201ENST00000407266 307 ntBASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AC092106.2-201ENST00000436597 487 ntBASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 RPEP4-201ENST00000437636 602 ntBASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.16□□□□□ -1.42
C9orf40Q8IXQ3 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms