Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.08□□□□□ -1.28
LHX1P48742 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.08□□□□□ -1.28
LHX1P48742 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.08□□□□□ -1.28
LHX1P48742 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.08□□□□□ -1.28
LHX1P48742 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.08□□□□□ -1.28
LHX1P48742 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.08□□□□□ -1.28
LHX1P48742 AL049840.5-201ENST00000602827 552 ntBASIC7.08□□□□□ -1.28
LHX1P48742 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.08□□□□□ -1.28
LHX1P48742 GAPDHP41-201ENST00000613707 975 ntBASIC7.08□□□□□ -1.28
LHX1P48742 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7.08□□□□□ -1.28
LHX1P48742 OR1N1-202ENST00000619659 939 ntBASIC7.08□□□□□ -1.28
LHX1P48742 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LHX1P48742 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX1P48742 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX1P48742 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
LHX1P48742 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.08□□□□□ -1.28
LHX1P48742 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.08□□□□□ -1.28
LHX1P48742 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LHX1P48742 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.08□□□□□ -1.28
LHX1P48742 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
LHX1P48742 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 NBPF8-201ENST00000583271 5330 ntBASIC7.07□□□□□ -1.28
LHX1P48742 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 AC074141.1-201ENST00000588129 2995 ntBASIC7.07□□□□□ -1.28
LHX1P48742 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 MRPS6P2-201ENST00000381143 370 ntBASIC7.07□□□□□ -1.28
LHX1P48742 U3.52-201ENST00000384034 216 ntBASIC7.07□□□□□ -1.28
LHX1P48742 AL133260.1-201ENST00000405720 405 ntBASIC7.07□□□□□ -1.28
LHX1P48742 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.07□□□□□ -1.28
LHX1P48742 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
LHX1P48742 RPSAP41-201ENST00000439695 860 ntBASIC7.07□□□□□ -1.28
LHX1P48742 AC099670.1-201ENST00000455141 783 ntBASIC7.07□□□□□ -1.28
LHX1P48742 RBMY2HP-201ENST00000457961 720 ntBASIC7.07□□□□□ -1.28
LHX1P48742 SULT1D1P-201ENST00000458020 882 ntBASIC7.07□□□□□ -1.28
LHX1P48742 AC114982.2-201ENST00000461396 358 ntBASIC7.07□□□□□ -1.28
LHX1P48742 RN7SL705P-201ENST00000481678 294 ntBASIC7.07□□□□□ -1.28
LHX1P48742 RN7SL413P-201ENST00000482700 297 ntBASIC7.07□□□□□ -1.28
LHX1P48742 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.07□□□□□ -1.28
LHX1P48742 AC093870.1-201ENST00000506837 213 ntBASIC7.07□□□□□ -1.28
LHX1P48742 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC7.07□□□□□ -1.28
LHX1P48742 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.07□□□□□ -1.28
LHX1P48742 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.07□□□□□ -1.28
LHX1P48742 AL162632.2-201ENST00000553933 399 ntBASIC7.07□□□□□ -1.28
LHX1P48742 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.07□□□□□ -1.28
LHX1P48742 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC7.07□□□□□ -1.28
LHX1P48742 AC005277.2-201ENST00000617898 390 ntBASIC7.07□□□□□ -1.28
LHX1P48742 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.07□□□□□ -1.28
LHX1P48742 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.07□□□□□ -1.28
LHX1P48742 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
LHX1P48742 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.07□□□□□ -1.28
LHX1P48742 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 MTCO1P25-201ENST00000414449 1799 ntBASIC7.07□□□□□ -1.28
LHX1P48742 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.07□□□□□ -1.28
LHX1P48742 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 TATDN2P3-201ENST00000452855 3665 ntBASIC7.07□□□□□ -1.28
LHX1P48742 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.07□□□□□ -1.28
LHX1P48742 AC010168.2-201ENST00000562691 5428 ntBASIC7.07□□□□□ -1.28
LHX1P48742 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.07□□□□□ -1.28
LHX1P48742 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.07□□□□□ -1.28
LHX1P48742 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LHX1P48742 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LHX1P48742 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.06□□□□□ -1.28
LHX1P48742 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.06□□□□□ -1.28
LHX1P48742 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.06□□□□□ -1.28
LHX1P48742 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LHX1P48742 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.06□□□□□ -1.28
LHX1P48742 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.06□□□□□ -1.28
LHX1P48742 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX1P48742 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
LHX1P48742 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX1P48742 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.06□□□□□ -1.28
LHX1P48742 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
LHX1P48742 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
LHX1P48742 RN7SKP38-201ENST00000410782 309 ntBASIC7.06□□□□□ -1.28
LHX1P48742 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.06□□□□□ -1.28
LHX1P48742 AL359092.1-201ENST00000417156 265 ntBASIC7.06□□□□□ -1.28
LHX1P48742 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.06□□□□□ -1.28
LHX1P48742 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.06□□□□□ -1.28
LHX1P48742 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.06□□□□□ -1.28
LHX1P48742 AC245291.3-201ENST00000443400 292 ntBASIC7.06□□□□□ -1.28
LHX1P48742 AC092601.1-201ENST00000444526 383 ntBASIC7.06□□□□□ -1.28
LHX1P48742 CCNJP1-201ENST00000450600 1149 ntBASIC7.06□□□□□ -1.28
LHX1P48742 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.06□□□□□ -1.28
LHX1P48742 RN7SL561P-201ENST00000488553 281 ntBASIC7.06□□□□□ -1.28
LHX1P48742 EIF4E2P2-201ENST00000492033 736 ntBASIC7.06□□□□□ -1.28
LHX1P48742 AK6-203ENST00000502819 743 ntTSL 5 BASIC7.06□□□□□ -1.28
LHX1P48742 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms