Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 AP002370.1-201ENST00000528055 1602 ntBASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 SNORA7A-201ENST00000384765 139 ntBASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 MIR1266-201ENST00000408125 84 ntBASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 RPL6P21-201ENST00000418672 846 ntBASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC092106.2-201ENST00000436597 487 ntBASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 AL020997.1-201ENST00000446554 349 ntBASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC093870.1-201ENST00000506837 213 ntBASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC116165.3-201ENST00000614524 400 ntBASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 AP001264.1-201ENST00000620602 703 ntBASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 AL450226.2-201ENST00000622913 439 ntBASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 PARP4P1-201ENST00000435945 2337 ntBASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC079248.1-201ENST00000427568 1546 ntBASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC004014.2-201ENST00000623718 5122 ntBASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRBV5-4A0A0C4DH59 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 CDY5P-201ENST00000411487 1580 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 CDY9P-201ENST00000451397 1580 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 RNA5SP512-201ENST00000364550 120 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 PSMD8P1-201ENST00000436275 769 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 GAPDHP37-201ENST00000442317 968 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 WDR82P2-201ENST00000444540 928 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 UBE2V2P4-201ENST00000447495 259 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 RPS4XP17-201ENST00000479057 754 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC139272.1-201ENST00000505516 640 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC131392.1-201ENST00000506490 633 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 RN7SL208P-201ENST00000577964 296 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC012175.1-201ENST00000603755 531 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC097467.4-201ENST00000605504 141 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AL513218.1-201ENST00000606527 391 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AP002345.2-201ENST00000609961 904 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AL121936.2-201ENST00000641935 662 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 AL731556.1-201ENST00000394628 3711 ntBASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRBV5-4A0A0C4DH59 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms