Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.02□□□□□ -1.13
CLIP2Q9UDT6 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 TEK-204ENST00000519097 3836 ntTSL 2 BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 AC007938.1-201ENST00000562524 2902 ntBASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 RNA5SP308-201ENST00000362532 115 ntBASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 Z82198.3-201ENST00000421145 199 ntBASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 AL590128.1-201ENST00000433407 286 ntBASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 EIF4E2P2-201ENST00000492033 736 ntBASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 AC140063.1-201ENST00000541343 259 ntBASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 GNG2-203ENST00000553432 577 ntTSL 4 BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 AC111186.1-201ENST00000604684 130 ntBASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 AC005514.1-201ENST00000623521 208 ntBASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 AC061999.1-201ENST00000624454 177 ntBASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 SNORA16A-202ENST00000628458 135 ntBASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CLIP2Q9UDT6 AC089998.1-201ENST00000548575 3141 ntBASIC8□□□□□ -1.13
CLIP2Q9UDT6 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8□□□□□ -1.13
CLIP2Q9UDT6 AL596244.1-201ENST00000567068 3779 ntBASIC8□□□□□ -1.13
CLIP2Q9UDT6 Z93929.1-201ENST00000418200 1475 ntBASIC8□□□□□ -1.13
CLIP2Q9UDT6 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
CLIP2Q9UDT6 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC8□□□□□ -1.13
CLIP2Q9UDT6 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CLIP2Q9UDT6 AC010132.4-201ENST00000569883 1368 ntBASIC8□□□□□ -1.13
CLIP2Q9UDT6 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CLIP2Q9UDT6 ZNF806-201ENST00000438300 1774 ntBASIC8□□□□□ -1.13
CLIP2Q9UDT6 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
CLIP2Q9UDT6 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 RNU1-5P-201ENST00000362684 144 ntBASIC8□□□□□ -1.13
CLIP2Q9UDT6 NOX1-203ENST00000372964 661 ntTSL 2 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 AK6-203ENST00000502819 743 ntTSL 5 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 RN7SKP196-201ENST00000516267 345 ntBASIC8□□□□□ -1.13
CLIP2Q9UDT6 RNA5SP318-201ENST00000516352 92 ntBASIC8□□□□□ -1.13
CLIP2Q9UDT6 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 AL390877.1-201ENST00000605704 214 ntBASIC8□□□□□ -1.13
CLIP2Q9UDT6 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC8□□□□□ -1.13
CLIP2Q9UDT6 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CLIP2Q9UDT6 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
CLIP2Q9UDT6 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC8□□□□□ -1.13
CLIP2Q9UDT6 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CLIP2Q9UDT6 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 AC022507.1-201ENST00000548349 1505 ntBASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 MIR191-201ENST00000384873 92 ntBASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 SNORD94-201ENST00000386037 137 ntBASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 FDPSP5-201ENST00000399474 1057 ntBASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 RPS10P21-201ENST00000430654 475 ntBASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 PMS2P9-201ENST00000441237 515 ntBASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 AL031681.1-201ENST00000443304 400 ntBASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 RN7SL187P-201ENST00000495587 303 ntBASIC7.99□□□□□ -1.13
CLIP2Q9UDT6 AC114324.2-202ENST00000503812 134 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms