Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 AC061975.3-201ENST00000583209 244 ntBASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 AC025171.4-201ENST00000607250 1047 ntBASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 PART1_3.1-201ENST00000619680 131 ntBASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 AC090774.4-201ENST00000578888 1372 ntBASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CCDC28BQ9BUN5 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.52□□□□□ -1.36
CCDC28BQ9BUN5 AC022613.3-201ENST00000560740 1346 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AC110373.1-201ENST00000505994 3505 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AC102941.1-201ENST00000567616 1537 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AC092724.1-201ENST00000624623 3397 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 RN7SKP186-201ENST00000365371 303 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 SLC25A5P7-201ENST00000406156 896 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 CYCSP17-201ENST00000407870 315 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AC097721.1-201ENST00000427150 1253 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AC018804.1-201ENST00000430381 618 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 FTLP17-201ENST00000432567 525 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 OR7E102P-201ENST00000448855 1015 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 GOT2P2-201ENST00000450663 1251 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 PYM1-204ENST00000454792 884 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 SNRPCP3-201ENST00000474888 476 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 RPL23AP80-201ENST00000495605 424 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AP001803.1-201ENST00000525668 147 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AC026458.1-201ENST00000564330 438 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 RN7SL25P-201ENST00000583862 260 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AL512329.1-201ENST00000404600 1592 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AC062022.1-201ENST00000451026 1684 ntBASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CCDC28BQ9BUN5 AC011455.2-201ENST00000599320 3336 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 AC006213.6-201ENST00000623722 4179 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 NCOA4P2-201ENST00000340589 1813 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 AC025470.1-201ENST00000510053 2032 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 U3.1-201ENST00000362500 215 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 RNU4-81P-201ENST00000363561 144 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 AL360271.1-201ENST00000395679 510 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 KATNBL1P2-201ENST00000433311 835 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 MYL6P3-201ENST00000436904 432 ntBASIC6.51□□□□□ -1.37
CCDC28BQ9BUN5 GAPDHP53-201ENST00000458397 924 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms