Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RN7SL657P-201ENST00000582431 293 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 AC009303.3-201ENST00000591103 736 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 AC009135.2-201ENST00000624136 1768 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 AC092725.2-201ENST00000567658 1389 ntBASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP3Q96JB5 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 SALL4P7-201ENST00000555779 3120 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 MIR187-201ENST00000385062 109 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 MIR541-201ENST00000401360 84 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AC091492.1-201ENST00000419844 272 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 PPIAP23-201ENST00000420099 497 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 MTND1P10-201ENST00000426108 832 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AL592114.2-201ENST00000440142 532 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 RWDD4P1-201ENST00000488019 565 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 RN7SL187P-201ENST00000495587 303 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 RPL10P7-201ENST00000495649 625 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AC105391.1-201ENST00000503155 1045 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 MTCYBP44-201ENST00000514835 823 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AP004607.6-201ENST00000525033 1202 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AL135978.1-201ENST00000553618 1266 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 RN7SL199P-201ENST00000578752 281 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 RN7SL131P-201ENST00000579043 256 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 RN7SL656P-201ENST00000579044 281 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 RN7SL404P-201ENST00000582421 281 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AP000919.1-201ENST00000582850 985 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AC013731.1-201ENST00000604340 883 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AC138473.1-201ENST00000605717 526 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AC091768.1-201ENST00000609258 930 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AP003789.1-201ENST00000617737 605 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AC131009.3-201ENST00000621809 287 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AP003400.2-201ENST00000624036 666 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 AL512329.1-201ENST00000404600 1592 ntBASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CDK5RAP3Q96JB5 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AC022306.1-201ENST00000560489 1562 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 MIR99A-201ENST00000384906 81 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 RNA5SP176-201ENST00000390956 110 ntBASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.69□□□□□ -1.18
CDK5RAP3Q96JB5 AL139135.1-201ENST00000412675 209 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms