Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC8.27□□□□□ -1.09
CHMP4CQ96CF2 CDY19P-201ENST00000411668 1613 ntBASIC8.27□□□□□ -1.09
CHMP4CQ96CF2 CDY18P-201ENST00000438294 1609 ntBASIC8.27□□□□□ -1.09
CHMP4CQ96CF2 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CHMP4CQ96CF2 TET1P1-201ENST00000426627 2301 ntBASIC8.27□□□□□ -1.09
CHMP4CQ96CF2 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHMP4CQ96CF2 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.27□□□□□ -1.09
CHMP4CQ96CF2 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHMP4CQ96CF2 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CHMP4CQ96CF2 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
CHMP4CQ96CF2 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHMP4CQ96CF2 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
CHMP4CQ96CF2 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CHMP4CQ96CF2 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
CHMP4CQ96CF2 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC8.27□□□□□ -1.09
CHMP4CQ96CF2 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CHMP4CQ96CF2 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 TRIM53CP-201ENST00000531490 1354 ntBASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 AL161901.1-201ENST00000624954 3425 ntBASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 VDAC1P10-201ENST00000416715 891 ntBASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 TRGV7-201ENST00000427089 353 ntBASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 OR51P1P-201ENST00000447547 942 ntBASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 RN7SL834P-201ENST00000461450 286 ntBASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 AC135721.2-201ENST00000464237 300 ntBASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 AP001960.1-201ENST00000506494 658 ntBASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 AC016144.1-201ENST00000548175 1087 ntBASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 AC091167.5-201ENST00000605689 894 ntBASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 AC012467.1-201ENST00000607740 256 ntBASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 AC119674.1-204ENST00000641348 1343 ntBASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CHMP4CQ96CF2 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 DDX43P1-201ENST00000510713 1763 ntBASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 DMD-211ENST00000378707 7410 ntTSL 5 BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 RNA5SP176-201ENST00000390956 110 ntBASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 AC012497.1-201ENST00000429392 575 ntBASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 AC018804.1-201ENST00000430381 618 ntBASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 AP002371.1-201ENST00000463604 433 ntBASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 OR4A21P-201ENST00000532759 944 ntBASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 AC244034.2-201ENST00000562504 509 ntBASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 AC026458.1-201ENST00000564330 438 ntBASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 SNORA70D-201ENST00000578836 135 ntBASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 GTF2IP6-201ENST00000583143 541 ntBASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 AC016911.1-201ENST00000613297 452 ntBASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 AL353684.1-201ENST00000622677 1120 ntBASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 AC005753.1-201ENST00000623837 618 ntBASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 AC073263.3-201ENST00000624449 858 ntBASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 MIR665-201ENST00000635949 72 ntBASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 YES1-203ENST00000577961 4554 ntTSL 5 BASIC8.25□□□□□ -1.09
CHMP4CQ96CF2 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms