Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 BRD7P6-201ENST00000431406 1860 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 RNA5SP152-201ENST00000365184 110 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 LDHAP5-201ENST00000394996 622 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AL451061.1-201ENST00000407887 862 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 RN7SKP188-201ENST00000410789 317 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AL139135.1-201ENST00000412675 209 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 RPL18AP14-201ENST00000417685 526 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AL161742.1-201ENST00000418154 584 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AC091492.1-201ENST00000419844 272 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 RPS6P14-201ENST00000425165 719 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 RPS10P21-201ENST00000430654 475 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AL139156.3-201ENST00000454802 394 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 RN7SL492P-201ENST00000460700 295 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AC106785.4-201ENST00000569492 412 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 MIR378H-201ENST00000579966 83 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AL953862.2-201ENST00000603089 820 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AL353807.4-201ENST00000604995 257 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AL445647.2-201ENST00000615170 130 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AC005393.1-201ENST00000617916 584 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 MRPL57P3-201ENST00000619218 176 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AC012653.2-201ENST00000621880 420 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 CDY5P-201ENST00000411487 1580 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 CDY9P-201ENST00000451397 1580 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AC007012.2-201ENST00000623206 1676 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 MTCO1P25-201ENST00000414449 1799 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AC127024.8-201ENST00000623719 2094 ntBASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
ZNF549Q6P9A3 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AC107980.1-201ENST00000558671 3355 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 RN7SKP130-201ENST00000364924 301 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AC019070.1-201ENST00000415008 1024 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AC009303.1-201ENST00000426307 352 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 PUDPP2-201ENST00000431423 643 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 PFN1P11-201ENST00000445829 389 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 RBMY2BP-202ENST00000451071 1156 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 RN7SL849P-201ENST00000485236 295 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AC010442.1-201ENST00000515583 816 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 IGHV3-57-201ENST00000520143 280 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 AC013488.1-201ENST00000526618 1838 ntBASIC6.63□□□□□ -1.35
ZNF549Q6P9A3 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms