Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MAPK10-350ENST00000641777 965 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 AC119674.1-209ENST00000642031 997 ntBASIC6.63□□□□□ -1.35
NR1H2P55055 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
NR1H2P55055 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NR1H2P55055 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NR1H2P55055 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NR1H2P55055 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.63□□□□□ -1.35
NR1H2P55055 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NR1H2P55055 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.62□□□□□ -1.35
NR1H2P55055 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NR1H2P55055 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC6.62□□□□□ -1.35
NR1H2P55055 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NR1H2P55055 ATP5A1P10-201ENST00000622403 1603 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NR1H2P55055 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC6.62□□□□□ -1.35
NR1H2P55055 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC6.62□□□□□ -1.35
NR1H2P55055 AC005261.6-201ENST00000623072 1387 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC6.62□□□□□ -1.35
NR1H2P55055 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
NR1H2P55055 AC119674.1-204ENST00000641348 1343 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NR1H2P55055 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NR1H2P55055 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.62□□□□□ -1.35
NR1H2P55055 RN7SKP30-201ENST00000411373 334 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 CBX1P3-201ENST00000413296 527 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NR1H2P55055 VN1R31P-201ENST00000417498 730 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 RPSAP1-201ENST00000421328 880 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 AJ239321.1-201ENST00000424255 564 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC6.62□□□□□ -1.35
NR1H2P55055 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.62□□□□□ -1.35
NR1H2P55055 H3F3BP1-201ENST00000440551 403 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 AL137074.1-201ENST00000442640 465 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.62□□□□□ -1.35
NR1H2P55055 AC040975.1-201ENST00000472104 316 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 TUBBP11-201ENST00000472255 252 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 AC093827.1-201ENST00000480094 861 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NR1H2P55055 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
NR1H2P55055 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NR1H2P55055 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC6.62□□□□□ -1.35
NR1H2P55055 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.62□□□□□ -1.35
NR1H2P55055 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.62□□□□□ -1.35
NR1H2P55055 AP003080.1-202ENST00000526526 915 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 SSU72P6-201ENST00000532644 488 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 AC016144.1-201ENST00000548175 1087 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.62□□□□□ -1.35
NR1H2P55055 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC6.62□□□□□ -1.35
NR1H2P55055 AC009268.1-201ENST00000561352 1203 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 AL137802.2-201ENST00000562878 1110 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 FRG2IP-201ENST00000563581 781 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.62□□□□□ -1.35
NR1H2P55055 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NR1H2P55055 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC6.62□□□□□ -1.35
NR1H2P55055 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.62□□□□□ -1.35
NR1H2P55055 AL355333.1-201ENST00000605632 279 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 AL133406.3-201ENST00000606817 541 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 OR7M1P-201ENST00000608946 533 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 AL445647.2-201ENST00000615170 130 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 AC021422.1-201ENST00000621212 473 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.62□□□□□ -1.35
NR1H2P55055 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC6.62□□□□□ -1.35
NR1H2P55055 AC233280.20-201ENST00000637412 416 ntBASIC6.62□□□□□ -1.35
NR1H2P55055 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.62□□□□□ -1.35
NR1H2P55055 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NR1H2P55055 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
NR1H2P55055 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NR1H2P55055 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NR1H2P55055 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.62□□□□□ -1.35
NR1H2P55055 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
NR1H2P55055 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.62□□□□□ -1.35
NR1H2P55055 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.62□□□□□ -1.35
NR1H2P55055 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
NR1H2P55055 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NR1H2P55055 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NR1H2P55055 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
NR1H2P55055 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
NR1H2P55055 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.62□□□□□ -1.35
NR1H2P55055 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
NR1H2P55055 AC011504.1-201ENST00000623331 4103 ntBASIC6.61□□□□□ -1.35
NR1H2P55055 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NR1H2P55055 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NR1H2P55055 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
NR1H2P55055 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
NR1H2P55055 AL357556.1-201ENST00000421884 1388 ntBASIC6.61□□□□□ -1.35
NR1H2P55055 EEF1A1P26-201ENST00000458319 1363 ntBASIC6.61□□□□□ -1.35
NR1H2P55055 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.61□□□□□ -1.35
NR1H2P55055 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.61□□□□□ -1.35
NR1H2P55055 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
NR1H2P55055 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NR1H2P55055 RNU6-697P-201ENST00000363348 107 ntBASIC6.61□□□□□ -1.35
NR1H2P55055 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NR1H2P55055 SNORA70H-201ENST00000383910 135 ntBASIC6.61□□□□□ -1.35
NR1H2P55055 SNORA70J-201ENST00000384182 135 ntBASIC6.61□□□□□ -1.35
NR1H2P55055 AL713922.1-201ENST00000416477 747 ntBASIC6.61□□□□□ -1.35
NR1H2P55055 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.61□□□□□ -1.35
NR1H2P55055 C1DP3-201ENST00000455013 423 ntBASIC6.61□□□□□ -1.35
NR1H2P55055 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.61□□□□□ -1.35
NR1H2P55055 AC115223.1-201ENST00000466377 870 ntBASIC6.61□□□□□ -1.35
NR1H2P55055 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms