Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 DDX18P6-201ENST00000450119 1997 ntBASIC6.71□□□□□ -1.34
VMP1Q96GC9 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
VMP1Q96GC9 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VMP1Q96GC9 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 UGT2B27P-201ENST00000505092 1620 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 RNA5SP218-201ENST00000363188 109 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 AC007068.1-201ENST00000396690 844 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 AL589994.1-201ENST00000404962 340 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 SNORA11D-201ENST00000408548 128 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 SNORA11E-201ENST00000408778 128 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 RNU4-64P-201ENST00000410795 131 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 MTND4LP21-201ENST00000415303 295 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 AC117434.1-201ENST00000419971 836 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 AL359633.1-201ENST00000421403 310 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 AC009362.1-201ENST00000427253 406 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 RPSAP7-201ENST00000456871 885 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 AC117395.2-201ENST00000463122 1128 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 PABPC1P10-201ENST00000464731 381 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 RPS10P28-201ENST00000480396 498 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 AF305872.1-201ENST00000485217 471 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 RN7SL104P-201ENST00000498686 293 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 LINC01085-203ENST00000511195 326 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 AC090971.3-201ENST00000557871 1041 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 AL713998.2-201ENST00000604538 1198 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 AP003400.2-201ENST00000624036 666 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 AC083837.1-201ENST00000565297 2994 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 AP003486.1-201ENST00000525716 3994 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VMP1Q96GC9 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
VMP1Q96GC9 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.7□□□□□ -1.34
VMP1Q96GC9 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VMP1Q96GC9 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VMP1Q96GC9 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VMP1Q96GC9 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VMP1Q96GC9 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VMP1Q96GC9 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VMP1Q96GC9 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 RN7SKP257-201ENST00000364525 309 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VMP1Q96GC9 RNU6-1055P-201ENST00000391085 107 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 RN7SKP85-201ENST00000411349 318 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 AL139135.1-201ENST00000412675 209 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC134879.1-201ENST00000426062 394 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 RPL14P5-201ENST00000436474 730 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 CT45A11P-201ENST00000448043 1134 ntBASIC6.69□□□□□ -1.34
VMP1Q96GC9 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC6.69□□□□□ -1.34
VMP1Q96GC9 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms