Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC4.63□□□□□ -1.67
RPL39P62891 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC4.63□□□□□ -1.67
RPL39P62891 RPL7P17-201ENST00000470927 724 ntBASIC4.63□□□□□ -1.67
RPL39P62891 AC009108.1-201ENST00000473913 796 ntBASIC4.63□□□□□ -1.67
RPL39P62891 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RPL39P62891 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RPL39P62891 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC4.63□□□□□ -1.67
RPL39P62891 RN7SKP67-201ENST00000515905 235 ntBASIC4.63□□□□□ -1.67
RPL39P62891 RPS20-202ENST00000518875 671 ntTSL 2 BASIC4.63□□□□□ -1.67
RPL39P62891 SUMO2P19-201ENST00000518920 295 ntBASIC4.63□□□□□ -1.67
RPL39P62891 AP001803.1-201ENST00000525668 147 ntBASIC4.63□□□□□ -1.67
RPL39P62891 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC4.63□□□□□ -1.67
RPL39P62891 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC4.63□□□□□ -1.67
RPL39P62891 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC4.63□□□□□ -1.67
RPL39P62891 AC073916.1-201ENST00000545095 130 ntBASIC4.63□□□□□ -1.67
RPL39P62891 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC4.63□□□□□ -1.67
RPL39P62891 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC4.63□□□□□ -1.67
RPL39P62891 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC4.63□□□□□ -1.67
RPL39P62891 AC106785.4-201ENST00000569492 412 ntBASIC4.63□□□□□ -1.67
RPL39P62891 AP003115.1-201ENST00000569849 463 ntBASIC4.63□□□□□ -1.67
RPL39P62891 RN7SL270P-201ENST00000579643 281 ntBASIC4.63□□□□□ -1.67
RPL39P62891 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC4.63□□□□□ -1.67
RPL39P62891 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC4.63□□□□□ -1.67
RPL39P62891 AC006116.6-201ENST00000593258 1103 ntBASIC4.63□□□□□ -1.67
RPL39P62891 BUB1P1-201ENST00000603541 607 ntBASIC4.63□□□□□ -1.67
RPL39P62891 AL356986.1-201ENST00000604085 341 ntBASIC4.63□□□□□ -1.67
RPL39P62891 AC005070.2-201ENST00000604391 260 ntBASIC4.63□□□□□ -1.67
RPL39P62891 AC025171.4-201ENST00000607250 1047 ntBASIC4.63□□□□□ -1.67
RPL39P62891 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC4.63□□□□□ -1.67
RPL39P62891 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC4.63□□□□□ -1.67
RPL39P62891 AL356585.10-201ENST00000641883 123 ntBASIC4.63□□□□□ -1.67
RPL39P62891 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RPL39P62891 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RPL39P62891 CREM-203ENST00000344351 1625 ntTSL 2 BASIC4.63□□□□□ -1.67
RPL39P62891 AC005725.1-201ENST00000577346 2607 ntBASIC4.63□□□□□ -1.67
RPL39P62891 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC4.63□□□□□ -1.67
RPL39P62891 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RPL39P62891 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC4.63□□□□□ -1.67
RPL39P62891 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RPL39P62891 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC4.63□□□□□ -1.67
RPL39P62891 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RPL39P62891 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RPL39P62891 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RPL39P62891 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RPL39P62891 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RPL39P62891 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC4.62□□□□□ -1.67
RPL39P62891 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RPL39P62891 AC020658.2-201ENST00000559030 4020 ntBASIC4.62□□□□□ -1.67
RPL39P62891 AL669831.5-218ENST00000591702 1873 ntBASIC4.62□□□□□ -1.67
RPL39P62891 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RPL39P62891 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.62□□□□□ -1.67
RPL39P62891 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RPL39P62891 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC4.62□□□□□ -1.67
RPL39P62891 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
RPL39P62891 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC4.62□□□□□ -1.67
RPL39P62891 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC4.62□□□□□ -1.67
RPL39P62891 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
RPL39P62891 GMFG-201ENST00000253054 616 ntTSL 5 BASIC4.62□□□□□ -1.67
RPL39P62891 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC4.62□□□□□ -1.67
RPL39P62891 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RPL39P62891 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RPL39P62891 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RPL39P62891 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC4.62□□□□□ -1.67
RPL39P62891 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC4.62□□□□□ -1.67
RPL39P62891 AC245884.2-201ENST00000426257 404 ntBASIC4.62□□□□□ -1.67
RPL39P62891 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC4.62□□□□□ -1.67
RPL39P62891 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC4.62□□□□□ -1.67
RPL39P62891 AC105052.2-201ENST00000434317 794 ntBASIC4.62□□□□□ -1.67
RPL39P62891 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC4.62□□□□□ -1.67
RPL39P62891 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC4.62□□□□□ -1.67
RPL39P62891 RPL23AP28-201ENST00000448062 470 ntBASIC4.62□□□□□ -1.67
RPL39P62891 TVP23CP1-201ENST00000450317 639 ntBASIC4.62□□□□□ -1.67
RPL39P62891 VNN3-210ENST00000450865 596 ntTSL 4 BASIC4.62□□□□□ -1.67
RPL39P62891 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC4.62□□□□□ -1.67
RPL39P62891 AC016489.1-201ENST00000461109 375 ntBASIC4.62□□□□□ -1.67
RPL39P62891 RN7SL308P-201ENST00000464971 297 ntBASIC4.62□□□□□ -1.67
RPL39P62891 RN7SL815P-201ENST00000470970 290 ntBASIC4.62□□□□□ -1.67
RPL39P62891 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RPL39P62891 AC022415.1-202ENST00000486612 523 ntBASIC4.62□□□□□ -1.67
RPL39P62891 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC4.62□□□□□ -1.67
RPL39P62891 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC4.62□□□□□ -1.67
RPL39P62891 SNX18P23-201ENST00000510867 677 ntBASIC4.62□□□□□ -1.67
RPL39P62891 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RPL39P62891 AC017007.1-201ENST00000511960 415 ntBASIC4.62□□□□□ -1.67
RPL39P62891 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC4.62□□□□□ -1.67
RPL39P62891 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC4.62□□□□□ -1.67
RPL39P62891 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC4.62□□□□□ -1.67
RPL39P62891 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC4.62□□□□□ -1.67
RPL39P62891 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC4.62□□□□□ -1.67
RPL39P62891 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC4.62□□□□□ -1.67
RPL39P62891 AL049869.4-201ENST00000555669 178 ntBASIC4.62□□□□□ -1.67
RPL39P62891 MIR3159-201ENST00000584572 74 ntBASIC4.62□□□□□ -1.67
RPL39P62891 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC4.62□□□□□ -1.67
RPL39P62891 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
RPL39P62891 CARSP1-201ENST00000603171 889 ntBASIC4.62□□□□□ -1.67
RPL39P62891 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC4.62□□□□□ -1.67
RPL39P62891 AC243830.3-201ENST00000616810 376 ntBASIC4.62□□□□□ -1.67
RPL39P62891 MRPL57P1-201ENST00000621486 265 ntBASIC4.62□□□□□ -1.67
RPL39P62891 AC073263.3-201ENST00000624449 858 ntBASIC4.62□□□□□ -1.67
RPL39P62891 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms