Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SSR1P43307 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
SSR1P43307 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
SSR1P43307 AC023886.2-201ENST00000321285 411 ntBASIC7.28□□□□□ -1.24
SSR1P43307 RN7SKP1-201ENST00000365525 307 ntBASIC7.28□□□□□ -1.24
SSR1P43307 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SSR1P43307 AC121334.1-201ENST00000396414 802 ntBASIC7.28□□□□□ -1.24
SSR1P43307 AC226101.1-201ENST00000401483 387 ntBASIC7.28□□□□□ -1.24
SSR1P43307 RN7SKP148-201ENST00000410179 275 ntBASIC7.28□□□□□ -1.24
SSR1P43307 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.28□□□□□ -1.24
SSR1P43307 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC7.28□□□□□ -1.24
SSR1P43307 AC134879.1-201ENST00000426062 394 ntBASIC7.28□□□□□ -1.24
SSR1P43307 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.28□□□□□ -1.24
SSR1P43307 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SSR1P43307 AC091390.2-201ENST00000432573 374 ntBASIC7.28□□□□□ -1.24
SSR1P43307 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC7.28□□□□□ -1.24
SSR1P43307 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.28□□□□□ -1.24
SSR1P43307 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SSR1P43307 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.28□□□□□ -1.24
SSR1P43307 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.28□□□□□ -1.24
SSR1P43307 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.28□□□□□ -1.24
SSR1P43307 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC7.28□□□□□ -1.24
SSR1P43307 AL683813.2-201ENST00000605245 502 ntBASIC7.28□□□□□ -1.24
SSR1P43307 AC012640.3-201ENST00000607847 430 ntBASIC7.28□□□□□ -1.24
SSR1P43307 AL161420.1-201ENST00000619393 264 ntBASIC7.28□□□□□ -1.24
SSR1P43307 AP005212.3-201ENST00000619964 528 ntBASIC7.28□□□□□ -1.24
SSR1P43307 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.28□□□□□ -1.24
SSR1P43307 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.28□□□□□ -1.24
SSR1P43307 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.28□□□□□ -1.24
SSR1P43307 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC7.28□□□□□ -1.24
SSR1P43307 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SSR1P43307 MAPK10-379ENST00000642013 1385 ntBASIC7.28□□□□□ -1.24
SSR1P43307 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SSR1P43307 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.28□□□□□ -1.24
SSR1P43307 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
SSR1P43307 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SSR1P43307 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SSR1P43307 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
SSR1P43307 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.27□□□□□ -1.24
SSR1P43307 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
SSR1P43307 PWRN1-212ENST00000569908 1435 ntBASIC7.27□□□□□ -1.24
SSR1P43307 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
SSR1P43307 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SSR1P43307 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
SSR1P43307 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SSR1P43307 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.27□□□□□ -1.25
SSR1P43307 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
SSR1P43307 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.27□□□□□ -1.25
SSR1P43307 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SSR1P43307 RN7SKP47-201ENST00000365347 328 ntBASIC7.27□□□□□ -1.25
SSR1P43307 U3.23-201ENST00000391132 200 ntBASIC7.27□□□□□ -1.25
SSR1P43307 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC7.27□□□□□ -1.25
SSR1P43307 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.27□□□□□ -1.25
SSR1P43307 RPL29P7-201ENST00000440227 457 ntBASIC7.27□□□□□ -1.25
SSR1P43307 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.27□□□□□ -1.25
SSR1P43307 AC092421.1-201ENST00000448148 418 ntBASIC7.27□□□□□ -1.25
SSR1P43307 PCMTD1P3-201ENST00000451824 472 ntBASIC7.27□□□□□ -1.25
SSR1P43307 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC7.27□□□□□ -1.25
SSR1P43307 TUBBP11-201ENST00000472255 252 ntBASIC7.27□□□□□ -1.25
SSR1P43307 SNRPCP3-201ENST00000474888 476 ntBASIC7.27□□□□□ -1.25
SSR1P43307 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC7.27□□□□□ -1.25
SSR1P43307 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC7.27□□□□□ -1.25
SSR1P43307 AC093815.1-201ENST00000508637 280 ntBASIC7.27□□□□□ -1.25
SSR1P43307 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.27□□□□□ -1.25
SSR1P43307 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.27□□□□□ -1.25
SSR1P43307 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC7.27□□□□□ -1.25
SSR1P43307 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.27□□□□□ -1.25
SSR1P43307 OR9L1P-201ENST00000529493 933 ntBASIC7.27□□□□□ -1.25
SSR1P43307 AL132640.2-202ENST00000559732 614 ntBASIC7.27□□□□□ -1.25
SSR1P43307 AC011193.2-201ENST00000582638 367 ntBASIC7.27□□□□□ -1.25
SSR1P43307 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC7.27□□□□□ -1.25
SSR1P43307 SIGLEC31P-201ENST00000594237 551 ntBASIC7.27□□□□□ -1.25
SSR1P43307 AC104117.5-201ENST00000606195 547 ntBASIC7.27□□□□□ -1.25
SSR1P43307 RN7SL126P-201ENST00000616400 299 ntBASIC7.27□□□□□ -1.25
SSR1P43307 AC026108.1-201ENST00000635444 547 ntBASIC7.27□□□□□ -1.25
SSR1P43307 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
SSR1P43307 AC129502.1-201ENST00000623261 1654 ntBASIC7.27□□□□□ -1.25
SSR1P43307 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SSR1P43307 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.27□□□□□ -1.25
SSR1P43307 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SSR1P43307 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.27□□□□□ -1.25
SSR1P43307 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.27□□□□□ -1.25
SSR1P43307 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.27□□□□□ -1.25
SSR1P43307 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.26□□□□□ -1.25
SSR1P43307 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 AC090774.4-201ENST00000578888 1372 ntBASIC7.26□□□□□ -1.25
SSR1P43307 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
SSR1P43307 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SSR1P43307 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SSR1P43307 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms