Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 NXPE2P1-201ENST00000543705 726 ntBASIC6.29□□□□□ -1.4
RFC3P40938 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.29□□□□□ -1.4
RFC3P40938 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.29□□□□□ -1.4
RFC3P40938 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.29□□□□□ -1.4
RFC3P40938 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.29□□□□□ -1.4
RFC3P40938 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RFC3P40938 AC127071.2-201ENST00000623293 527 ntBASIC6.29□□□□□ -1.4
RFC3P40938 AC004943.1-203ENST00000624370 1074 ntBASIC6.29□□□□□ -1.4
RFC3P40938 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.29□□□□□ -1.4
RFC3P40938 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.29□□□□□ -1.4
RFC3P40938 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RFC3P40938 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.29□□□□□ -1.4
RFC3P40938 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RFC3P40938 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.29□□□□□ -1.4
RFC3P40938 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.29□□□□□ -1.4
RFC3P40938 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.29□□□□□ -1.4
RFC3P40938 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.28□□□□□ -1.4
RFC3P40938 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.28□□□□□ -1.4
RFC3P40938 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RFC3P40938 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.28□□□□□ -1.4
RFC3P40938 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.28□□□□□ -1.4
RFC3P40938 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.28□□□□□ -1.4
RFC3P40938 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RFC3P40938 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 FANCD2P2-201ENST00000437591 1400 ntBASIC6.28□□□□□ -1.4
RFC3P40938 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
RFC3P40938 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.28□□□□□ -1.4
RFC3P40938 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RFC3P40938 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.28□□□□□ -1.4
RFC3P40938 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 RNU4-64P-201ENST00000410795 131 ntBASIC6.28□□□□□ -1.4
RFC3P40938 RNA5SP155-201ENST00000411154 129 ntBASIC6.28□□□□□ -1.4
RFC3P40938 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.28□□□□□ -1.4
RFC3P40938 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.28□□□□□ -1.4
RFC3P40938 RPLP1P10-201ENST00000413972 339 ntBASIC6.28□□□□□ -1.4
RFC3P40938 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.28□□□□□ -1.4
RFC3P40938 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.28□□□□□ -1.4
RFC3P40938 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.28□□□□□ -1.4
RFC3P40938 RPS3AP49-201ENST00000472161 790 ntBASIC6.28□□□□□ -1.4
RFC3P40938 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.28□□□□□ -1.4
RFC3P40938 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.28□□□□□ -1.4
RFC3P40938 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.28□□□□□ -1.4
RFC3P40938 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.28□□□□□ -1.4
RFC3P40938 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.28□□□□□ -1.4
RFC3P40938 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.28□□□□□ -1.4
RFC3P40938 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.28□□□□□ -1.4
RFC3P40938 AC009955.2-201ENST00000597288 542 ntBASIC6.28□□□□□ -1.4
RFC3P40938 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.28□□□□□ -1.4
RFC3P40938 MIR6780B-201ENST00000610307 79 ntBASIC6.28□□□□□ -1.4
RFC3P40938 AC015819.1-201ENST00000613588 663 ntBASIC6.28□□□□□ -1.4
RFC3P40938 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.28□□□□□ -1.4
RFC3P40938 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.28□□□□□ -1.4
RFC3P40938 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.28□□□□□ -1.4
RFC3P40938 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RFC3P40938 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.28□□□□□ -1.4
RFC3P40938 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.28□□□□□ -1.4
RFC3P40938 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFC3P40938 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.28□□□□□ -1.4
RFC3P40938 AL512329.1-201ENST00000404600 1592 ntBASIC6.27□□□□□ -1.41
RFC3P40938 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFC3P40938 AC092701.1-201ENST00000623627 1551 ntBASIC6.27□□□□□ -1.41
RFC3P40938 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.27□□□□□ -1.41
RFC3P40938 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFC3P40938 AC023632.6-201ENST00000624338 2177 ntBASIC6.27□□□□□ -1.41
RFC3P40938 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RFC3P40938 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.27□□□□□ -1.41
RFC3P40938 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFC3P40938 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.27□□□□□ -1.41
RFC3P40938 AC009135.2-201ENST00000624136 1768 ntBASIC6.27□□□□□ -1.41
RFC3P40938 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RFC3P40938 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RFC3P40938 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.27□□□□□ -1.41
RFC3P40938 SUMO2P13-201ENST00000403109 272 ntBASIC6.27□□□□□ -1.41
RFC3P40938 AL033519.1-201ENST00000407266 307 ntBASIC6.27□□□□□ -1.41
RFC3P40938 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.27□□□□□ -1.41
RFC3P40938 Z82198.3-201ENST00000421145 199 ntBASIC6.27□□□□□ -1.41
RFC3P40938 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.27□□□□□ -1.41
RFC3P40938 AHCYP8-201ENST00000425108 209 ntBASIC6.27□□□□□ -1.41
RFC3P40938 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.27□□□□□ -1.41
RFC3P40938 AL354714.5-201ENST00000450131 590 ntBASIC6.27□□□□□ -1.41
RFC3P40938 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFC3P40938 RN7SL836P-201ENST00000476140 296 ntBASIC6.27□□□□□ -1.41
RFC3P40938 RN7SL654P-201ENST00000479178 292 ntBASIC6.27□□□□□ -1.41
RFC3P40938 AC096743.1-201ENST00000485172 319 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms